Gene Mmcs_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1406 
Symbol 
ID4110243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp1522633 
End bp1523712 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content68% 
IMG OID638030527 
ProductTrkA-N 
Protein accessionYP_638574 
Protein GI108798377 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.23449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTAGAG GCCGTCTCCG GCGTCGGCTC GGACGTATCA ACCAGTCGCT GGCCGACCAG 
CCCGTCCACT CGCTCGTCGA CCGGGTCACG ATCCCGCAGG ACGTGCCCAG CCCGTGGGTG
CGGATCACCA AGCGAATCGT CATCGCGTTC GCGGTGCTGT GCGCGGTCGT GCTCATCGTC
TACATCGACC GTGACGGGTA CCGGGACACC CAGACCGACG GGCTGTCTCT GCTCGATTGC
TTCTACTACG CGACCGTCTC GCTGTCGACG ACGGGCTACG GCGACATCAC CCCGGTCACC
GAGGGCGCCC GCTTCGTCAA CATCGTCGTG ATCACACCCC TGCGGGTGGC GTTCCTGATC
GTGCTGATCG GCACCACGGT CGAGACCCTG ACGACCGAGT CGCGTCAGGC GTTCAAAATT
CAGCAGTGGA GGAACAAGGT GCGCAACCAC ACTGTCGTCA TCGGATACGG CACCAAAGGC
CGGACGGCGG TGGCCGCCAT GATCGGTGAC GAGGTCGCAC CGGCCGACAT CGTCGTGGTC
GACGAGAACC CGGCGGCCCT CGAGCGCGCC CGGAACGCCG GTCTGGTGAC GGTACGCGGC
AGCGCCACCG ATTCCGAGGT CCTCCGGCTG GCCAGCGCGC AGCACGCCAA GTCGATCATC
GTTGCCACCA ACCGCGACGA CACCGCGGTC CTGGTCACCC TCACCGCGCG GGAACTGGCA
CCGAAGGCGA AGATCATCGC CGCGGTCCGG GAGGCGGAGA ATCAGCACCT CCTGGAGCAG
TCCGGTGCGG ATTCGACAGT GGTGACCTCC GAGACCGCCG GTCGCCTGCT CGGCATCGCC
ACGCAGACCC CGAGCGTGGT GGAGATGATG GAGGATCTGC TCACCCCCGA CGCGGGCTTC
GCGATCGCCG AACGCGAGGT CACCCCGAAG GAGGCGGGCG GGTCGCCGCG CCACCTGCAC
GACATCGTCC TCGGTGTCGT GCGCGACGGG GCACTGGTAC GCGTCGACGC CCCCGAGGTC
GACGCGCTGG AACTGGGTGA CCGGCTGCTC TACATCCGCA GCGCGGACGC CGAACGGTGA
 
Protein sequence
MARGRLRRRL GRINQSLADQ PVHSLVDRVT IPQDVPSPWV RITKRIVIAF AVLCAVVLIV 
YIDRDGYRDT QTDGLSLLDC FYYATVSLST TGYGDITPVT EGARFVNIVV ITPLRVAFLI
VLIGTTVETL TTESRQAFKI QQWRNKVRNH TVVIGYGTKG RTAVAAMIGD EVAPADIVVV
DENPAALERA RNAGLVTVRG SATDSEVLRL ASAQHAKSII VATNRDDTAV LVTLTARELA
PKAKIIAAVR EAENQHLLEQ SGADSTVVTS ETAGRLLGIA TQTPSVVEMM EDLLTPDAGF
AIAEREVTPK EAGGSPRHLH DIVLGVVRDG ALVRVDAPEV DALELGDRLL YIRSADAER