Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1379 |
Symbol | |
ID | 4110216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 1495544 |
End bp | 1496257 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638030500 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_638547 |
Protein GI | 108798350 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02947] RNA polymerase sigma-70 factor, TIGR02947 family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCAACGG CCTGCCTGGA TCGTCCGGTG GATCTGCCGG GCCTGTTCGA CGGCGCCGCG ACAGAAGGGA CGGTGTCGAC CACGATGACC GACATCGACG GTGCGGCGGC CGAACGACAG GAAACCGACG CCGAACTGAC CGCGCGTTTC GAGCGCGATG CGATACCGCT GCTCGACCAG CTCTACGGCG GCGCGCTGCG CATGACGCGC AATCCCGCCG ACGCCGAGGA TCTGCTGCAG GAGACGATGG TCAAGGCCTA TGCCGGGTTC CGGTCGTTCC GCGAGGGCAC CAACCTCAAG GCGTGGCTAT ACCGCATCCT GACCAACACC TACATCAACA GCTACCGCAA GAAGCAGCGC CAGCCGTCGG AGTACCCCAC CGAGGAGATC ACGGACTGGC AGCTCGCCGC GAACGCCGAG CATTCGTCGA CGGGGCTGCG GTCTGCCGAG GTCGAGGCGC TCGAATCGCT GCCCGACACG GAGATCAAGG CGGCGTTGCA GGCGCTGCCG GAGGATTTCC GGATGGCGGT GTACTACGCC GACGTCGAAG GATTCCCGTA CAAGGAGATC GCGGAGATCA TGGATACGCC CATCGGGACC GTGATGTCCC GGTTGCATCG TGGCCGCAAG CAGCTCCGTG AGCTGCTCGC CGATGTCGCC CGAGACCGCG GGTTCCTCCG CGGTGCGCAA GCGCCCGAGG AGGTGTCGTC GTGA
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Protein sequence | MPTACLDRPV DLPGLFDGAA TEGTVSTTMT DIDGAAAERQ ETDAELTARF ERDAIPLLDQ LYGGALRMTR NPADAEDLLQ ETMVKAYAGF RSFREGTNLK AWLYRILTNT YINSYRKKQR QPSEYPTEEI TDWQLAANAE HSSTGLRSAE VEALESLPDT EIKAALQALP EDFRMAVYYA DVEGFPYKEI AEIMDTPIGT VMSRLHRGRK QLRELLADVA RDRGFLRGAQ APEEVSS
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