| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1281 |
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| Symbol | |
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| ID | 4110118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | + |
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| Start bp | 1388668 |
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| End bp | 1389459 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638030402 |
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| Product | RNA polymerase sigma factor SigF |
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| Protein accession | YP_638449 |
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| Protein GI | 108798252 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.167478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGCCAT CGTCGGCACA GGGTTCGTCG CCACGACAGA ACTCTGAGTA CTCGGACGTG
GCCCCCATGT TCCGGGAACT TCAGGGGCTC ACCCCGAGCA CACCTCAGTT CCAGCGTCAG
CGCGACCGGA TCGTCGAACG CTGCCTTCCG CTTGCCGATC ACATCGCCCG TCGCTTCGAC
GGCCGCGGCG AGCCGCGCGA CGACCTCGTC CAGGTCGCCC GGGTCGGCCT GGTCAACGCG
GTGATCCGCT TCGACGTCGA CGCCGGATCG GATTTCGTGT CGTTCGCGGT GCCCACCATC
ATGGGTGAGG TCCGGCGGCA CTTCCGGGAC AACAGCTGGT CGGTCAAGGT GCCCCGCCGG
CTCAAGGAAC TGCACCTGCG CCTCGGGTCG GCGACCGCCG AACTGTCCCA GCGCCTGGGC
CGCGCGCCGA CGGCCAGCGA ACTCGCCGAG GAACTCGGCA TGGACCGCGA CGAGGTGGTC
GAGGGCCTGG TCGCAGGCAG TTCATACAAC ACGCTGTCGA TCGACAGCGG CGGCAACAGC
GGTAACGAGG ATGCGCCCGC GATCGCTGAC ACCCTCGGCG ATGTGGACCT GGGTCTCGAC
CAGATCGAGA ACCGCGAGGC ACTGCGACCG CTGCTGGCCG CGCTTCCGGA GCGCGAGCGC
ATGGTCCTGC TGCTGCGGTT CTTCGAGAAC CTCACCCAGA CCCAGATCGC CGAACGGGTC
GGCATCTCGC AGATGCACGT GTCCAGGCTG CTGGCCAAAT CGCTAACGCG GCTCCGCGAC
CAGTTGCAGT AG
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| Protein sequence | MTPSSAQGSS PRQNSEYSDV APMFRELQGL TPSTPQFQRQ RDRIVERCLP LADHIARRFD
GRGEPRDDLV QVARVGLVNA VIRFDVDAGS DFVSFAVPTI MGEVRRHFRD NSWSVKVPRR
LKELHLRLGS ATAELSQRLG RAPTASELAE ELGMDRDEVV EGLVAGSSYN TLSIDSGGNS
GNEDAPAIAD TLGDVDLGLD QIENREALRP LLAALPERER MVLLLRFFEN LTQTQIAERV
GISQMHVSRL LAKSLTRLRD QLQ
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