Gene Mmcs_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1245 
Symbol 
ID4110082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp1347816 
End bp1348997 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content73% 
IMG OID638030366 
Productpeptidase M20D, amidohydrolase 
Protein accessionYP_638413 
Protein GI108798216 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTCCG CCACCGCGTC GACGAGCGTC GAAGACGCCG TCCACCGCCG CCGCGGAGAC 
CTCGTCGAGT TGTCACACGC CATCCACGCC GAGCCGGAAC TGGCGTTCGG CGAATACCGC
AGCTGCGCCA AGACCCAGGC GTTGGTCGCG GAGTACGGCT TCGAGATGAC TTCCCCGGTC
GGCGGCCTCG ACACCGCATT CCGCGCCTCG TACGGCAGCG GGTCGCTGGT GGTCGGAGTG
TGCGCGGAGT ACGACGCGCT GCCCGATATC GGGCACGCGT GCGGCCACAA CATCATCGCC
GCCTCGGCCG TCGGCACCGC GCTGGCGCTC GCCGAGGTCG CCGACGACCT CGACTTGACC
GTGGTGCTGT TGGGCACACC GGCCGAGGAG GCCGGCGGCG GCAAGATCCT GATGCTCGAG
CGGGGGGTGT TCGACGACAT CGCCGTCGCG GTGATGCTGC ATCCCGGGCC GGTGGACATC
GCCGCGGCGA GGTCGCTGGC GCTCTCGGAG GTCGACGTCA CCTACACCGG GCGGGAGTCG
CACGCCGCGG TCGCCCCCCA CCTCGGGCTC AACGCCGGCG ACGCCGTCAC CGTCGCGCAG
GTGGCGATCG GGTTGCTGCG CCAGCAGTTG GCGCCGGGGC AGATGGTGCA CGGGATCGTC
ACCGACGGCG GCCGGGCCAC CAACGTCATC CCGGCCCACG CCGTGCTGCG CTATTCGATG
CGCGCCGCCG AATCGGTGTC GCTGCGCGAA CTCGAGGACC GGATGGCGGG CTGCTTCCAG
GCGGGCGCCG TCGCCACCGG CTGCGACTAT GAGGTCACCG AGACCGCACC GGCGTACGCC
GAGCTGACCC CGGACCACTG GCTGGCCGCG GTGGTCCGCG ACGAGATGGA GCGGGTCGGC
CGCGCTCCGG TGCCCGTCGA GGTCGAGGCC GCGCTGCCCC TCGGCAGCAC CGACATGGGC
AACGTCACGC AGGTCGTACC CGGTATCCAC CCGGTGGTGG GCATCGACGC CGGCGGCGCG
TCGATCCACC AGCCGGCGTT CACCGCGGCC GCCGCGGGAC CCAGCGCGGA CAGGGCCGTC
GTCGAGGGTG CGATCATGTT GGCCCGCACT GTGGTTCGTC TCGCCGAGAC GCCCGCGGAG
CGGGACCGGG TGTTGCAGCG GCAGGAGAGG CGGGCGTCGT GA
 
Protein sequence
MPSATASTSV EDAVHRRRGD LVELSHAIHA EPELAFGEYR SCAKTQALVA EYGFEMTSPV 
GGLDTAFRAS YGSGSLVVGV CAEYDALPDI GHACGHNIIA ASAVGTALAL AEVADDLDLT
VVLLGTPAEE AGGGKILMLE RGVFDDIAVA VMLHPGPVDI AAARSLALSE VDVTYTGRES
HAAVAPHLGL NAGDAVTVAQ VAIGLLRQQL APGQMVHGIV TDGGRATNVI PAHAVLRYSM
RAAESVSLRE LEDRMAGCFQ AGAVATGCDY EVTETAPAYA ELTPDHWLAA VVRDEMERVG
RAPVPVEVEA ALPLGSTDMG NVTQVVPGIH PVVGIDAGGA SIHQPAFTAA AAGPSADRAV
VEGAIMLART VVRLAETPAE RDRVLQRQER RAS