Gene Mmcs_1240 details

Gene Information

• Locus tag: Mmcs_1240
• Symbol: upp
• ID: 4110077
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: +
• Start bp: 1343081
• End bp: 1343698
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 638030361
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_638408
• Protein GI: 108798211
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0174624
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGCGTCG TCGATCACCC GCTGGCCGCT GCTCGACTGA CCACGCTGCG CGACCAGTCC 
ACCGACAATG CGGCATTCCG TTCGGCGTTG CGCGATCTCA CGCTGATGCT GGTCTACGAG 
GCCACCCGCG ACGCCGCCCG CGAGGACGTC GAGGTGCGCA CCCCGCTGGC GGTGACGACC 
GGGTCGCGGC TGGCGCGCCC GCCGCTGCTG GTTCCGGTCC TGCGCGCCGG GCTCGGGATG 
GTCGACCAGG CGCACGCGCT GATCCCCGAG GCGCGGGTGG GGTTCGTCGG CGTGGCCCGC 
AACGAGGAAA CCCACGAGCC GACACCGTAT CTGGAGTCGC TGCCCGCCGA CCTGAGCACA 
CAGCCGGTGT TCGTGCTCGA TCCGATGCTC GCCACCGGCG GGTCGCTGGC CCACACCGTC 
GGGCTGTTGC AGGCGCGCGG CGCCGTCGAC ATCACCGCCA TCTGTGTGGT GGTCGCGCCG 
GAGGGTGTCG CCACCCTCGA ACGGGCCGCG CCGCACATGC GGCTGTTCAC CGCGACGATC 
GACGAATGCC TCGACGAGGC CGCCTACATC GTGCCCGGAC TCGGTGACGC CGGAGACCGG 
CAGTTCGGTC CGCGCTGA 

 

Protein sequence

MRVVDHPLAA ARLTTLRDQS TDNAAFRSAL RDLTLMLVYE ATRDAAREDV EVRTPLAVTT 
GSRLARPPLL VPVLRAGLGM VDQAHALIPE ARVGFVGVAR NEETHEPTPY LESLPADLST 
QPVFVLDPML ATGGSLAHTV GLLQARGAVD ITAICVVVAP EGVATLERAA PHMRLFTATI 
DECLDEAAYI VPGLGDAGDR QFGPR