Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1232 |
Symbol | deoA |
ID | 4110069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 1330080 |
End bp | 1331426 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638030353 |
Product | thymidine phosphorylase |
Protein accession | YP_638400 |
Protein GI | 108798203 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0213] Thymidine phosphorylase |
TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.32576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGGACT TCACTTTCGA CGCGCCCCGG CCGATGTCGC ATCTCGATGC TCCGACCGTC ATCCGGGTCA AACGCGACGG CGGCGACCTG CCCGACGAGG CGATCGACTG GGTGATCGAC GCGTACACCC GCGGGCAGGT GGCCGACGAG CAGATGTCGG CCCTGCTGAT GGCGATCTTC CTGCGCGGGA TGACCGGCCC CGAGATCGCG CGCTGGACAG CGGCGATGGT GGCATCGGGG CAGCGGTTCG ACTTCACCGA TCTGCGACGC GGCGGCCGTC CGCTGGCGCT GGTCGACAAA CACTCCACCG GCGGGGTCGG CGACAAGATC ACCATCCCGC TGGTGCCTGT CGTGATGGCC TGCGGCGGCG CGGTGCCCCA GGCCGCCGGA CGCGGGCTCG GCCACACCGG CGGCACCCTC GACAAACTCG AAGCCATCCC CGGATTCACC GCCGAACTGA CCAAAAGCCA GATCCGCCAA CAACTCAGCG AGATCGGTGC GGCGATCTTC GCCGCGGGTG AGCTGGCCCC GGCCGACCGC AAGATCTATG CGCTGCGCGA CGTCACCGCC ACCACCGAAT CGCTGCCGCT GATCGCCAGC TCGGTGATGA GCAAGAAGAT CGCCGAGGGC GCCCGCGCGC TGGTGCTCGA CACGAAGGTC GGTTCGGGCG CCTTCCTGCC CACCGAGGCC GAGGCCCGCG AACTGGCCCG CACGATGGTC GAGTTGGGTC ACGCGCACGG TCTGGTGACG CGCGCCCTGC TGACCGACAT GTCGGTGCCG CTGGGCCGCG CCGTCGGCAA CGCGGTCGAG GTCGTCGAAT CGCTGGAGGT GCTCGCCGGC GGCGGGCCCG ACGACGTGGT GGAACTGACG CTGGCGTTGG CGGCCGAGAT GCTCGACGCC GCCGGGATCG ACGGGACCGA CCCCGCCGAG ACGCTGCGCG ACGGTACCGC CATGGACTGT TTCCGCGCGC TCGTCGCGGC CCAGGGCGGC GACACCTCCC GATTGGCCGC CGACGCGTTG CCCATCGGTG TCCACACCGA CACCGTCACG GCACCGCGCG GTGGCACCAT GGGTGACATC GACGCGATGG CGGTGGGTCT GGCGGTGTGG CGGCTCGGAG CGGGCCGCTC GGCGCCCGGT GAGCAGGTGC AGTTCGGCGC CGGTCTCCGC ATCCACCGCC GTCCCGGTGA GCCGGTGAGT GCGGGCGAGC CGCTGTTCAC CCTCTACACC GACACCCCCG ACCGGCTCGG GCCGGCCCGA GCCGAACTCG AGGGTGCCTG GACGGTGGGG GACAGTGCCC CGCCGGCGCG TCCGCTGATC ATCGACCGGA TCACCGCGAC AGGCTGA
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Protein sequence | MTDFTFDAPR PMSHLDAPTV IRVKRDGGDL PDEAIDWVID AYTRGQVADE QMSALLMAIF LRGMTGPEIA RWTAAMVASG QRFDFTDLRR GGRPLALVDK HSTGGVGDKI TIPLVPVVMA CGGAVPQAAG RGLGHTGGTL DKLEAIPGFT AELTKSQIRQ QLSEIGAAIF AAGELAPADR KIYALRDVTA TTESLPLIAS SVMSKKIAEG ARALVLDTKV GSGAFLPTEA EARELARTMV ELGHAHGLVT RALLTDMSVP LGRAVGNAVE VVESLEVLAG GGPDDVVELT LALAAEMLDA AGIDGTDPAE TLRDGTAMDC FRALVAAQGG DTSRLAADAL PIGVHTDTVT APRGGTMGDI DAMAVGLAVW RLGAGRSAPG EQVQFGAGLR IHRRPGEPVS AGEPLFTLYT DTPDRLGPAR AELEGAWTVG DSAPPARPLI IDRITATG
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