| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1228 |
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| Symbol | sdhA |
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| ID | 4110065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | - |
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| Start bp | 1326764 |
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| End bp | 1328518 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638030349 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_638396 |
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| Protein GI | 108798199 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.394279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGATTG AACATCGCTA CGACGTCGTC ATCGTCGGGG CCGGCGGCGC GGGTATGCGC
GCCGCGGTCG AGGCGGGTCC GCGCGCCCGC ACCGCGGTGC TGACCAAGCT GTACCCGACC
CGCAGCCACA CCGGCGCGGC CCAGGGCGGC ATGTGCGCCG CGCTGGCCAA CGTCGAAGAG
GACAACTGGG AGTGGCACAC CTTCGACACC GTCAAGGGCG GCGACTACCT CGCCGACCAG
GACGCCGTCG AGATCATGTG CAAGGAAGCC ATCGACGCGG TGCTCGACCT CGAGAAGATG
GGGATGCCCT TCAACCGCAC CCCCGAGGGC CGCATCGACC AGCGCCGGTT CGGCGGGCAC
ACCCGTGACC ACGGCAAGGC CCCGGTGCGC CGGGCCTGTT ACGCCGCCGA CCGCACCGGC
CACATGATCC TGCAGACGCT GTATCAAAAC TGCGTCAAAC ACGACGTCGA GTTCTTCAAC
GAGTTCTACG CCCTCGACAT CACGCTGACC GAGACCCCCG GCGGCCCGGT GGCCACCGGC
GTCATCGCCT ACGAGTTGGC GACCGGCGAC ATCCACGTCT TCCACGCCAA GGCGATCGTG
TTCGCCACCG GCGGTTCGGG CCGGATGTAC AAGACGACGT CCAACGCGCA CACGCTGACC
GGCGACGGGC TGGGCATCGT CTTCCGCAAG GGTCTGCCGC TGGAGGACAT GGAGTTCCAC
CAGTTCCACC CGACCGGTCT GGCCGGCCTC GGCATCCTCA TCTCCGAGGC CGTGCGCGGT
GAGGGCGGTC GCCTGCTCAA CGGCGACGGC GAACGGTTCA TGGAGCGCTA CGCGCCGACC
ATCGTCGACC TCGCCCCGCG TGACATCGTC GCCCGCTCGA TGGTCCTCGA GGTGCTCGAG
GGCCGCGGCG CCGGACCGAA CAAGGACTAC GTCTACATCG ACGTGCGCCA CCTCGGCGAG
GACGTCCTCG AGGCGAAGCT GCCCGACATC ACCGAATTCG CCCGCACCTA CCTCGGTGTC
GACCCGGTCA AGGAACTGGT GCCGGTCTAC CCCACCTGCC ACTACGTCAT GGGCGGCATC
CCGACCACCG TGCACGGTCA GGTGCTGCGC GACAACACCA CGATCGTCCC GGGTCTTTAC
GCCGCCGGCG AGTGCGCCTG CGTGTCGGTG CACGGCGCCA ACCGGCTGGG CACCAACTCG
CTGCTCGACA TCAACGTGTT CGGCCGCCGC GCCGGGATCG CCGCCGCCAA CTACGCATTG
GGCCACGACT TCGTCGACCT GCCCGAGCGG CCCGCCGAGA TGGTGGTCAA CTGGGTCGGC
GACATCCTCT CCGAGCACGG CAACGAGCGC GTCGCCGACA TCCGCGGTGC GCTGCAGCAG
TCGATGGACA ACAACGCCGC GGTGTTCCGC ACCGAGGAAA CCCTCAAGCA GGCCCTGACC
GACATCCACG CGCTCAAGGA GCGCTACTCG CGAATCACGG TGCAGGACAA GGGAAAACGC
TACAACAGCG ACCTGCTCGA GGCGATCGAG CTGGGCTTCC TGCTCGAACT GGCCGAGGTC
ACCGTCGTCG GCGCGCTGAA CCGGAAGGAA TCTCGCGGCG GCCACGCGCG CGAGGACTAC
CCCAACCGCG ACGACACCAA CTACATGCGC CACACCATGG CCTACAAGGA GGGCACCGAC
CTGCTCTCCG ACGTGCGCCT GGACTACAAG CCCGTGGTGC AGACCCGCTA CGAGCCGATG
GAACGGAAGT ACTGA
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| Protein sequence | MLIEHRYDVV IVGAGGAGMR AAVEAGPRAR TAVLTKLYPT RSHTGAAQGG MCAALANVEE
DNWEWHTFDT VKGGDYLADQ DAVEIMCKEA IDAVLDLEKM GMPFNRTPEG RIDQRRFGGH
TRDHGKAPVR RACYAADRTG HMILQTLYQN CVKHDVEFFN EFYALDITLT ETPGGPVATG
VIAYELATGD IHVFHAKAIV FATGGSGRMY KTTSNAHTLT GDGLGIVFRK GLPLEDMEFH
QFHPTGLAGL GILISEAVRG EGGRLLNGDG ERFMERYAPT IVDLAPRDIV ARSMVLEVLE
GRGAGPNKDY VYIDVRHLGE DVLEAKLPDI TEFARTYLGV DPVKELVPVY PTCHYVMGGI
PTTVHGQVLR DNTTIVPGLY AAGECACVSV HGANRLGTNS LLDINVFGRR AGIAAANYAL
GHDFVDLPER PAEMVVNWVG DILSEHGNER VADIRGALQQ SMDNNAAVFR TEETLKQALT
DIHALKERYS RITVQDKGKR YNSDLLEAIE LGFLLELAEV TVVGALNRKE SRGGHAREDY
PNRDDTNYMR HTMAYKEGTD LLSDVRLDYK PVVQTRYEPM ERKY
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