Gene Mmcs_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1223 
Symbol 
ID4110060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp1322613 
End bp1323536 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content72% 
IMG OID638030344 
ProductRNA polymerase sigma factor SigJ 
Protein accessionYP_638391 
Protein GI108798194 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCGA GTGCGCGGAT CGACGAGTTC GAGAGCCTGC GACCGTATCT GCTGTCGGTG 
GGCTACCGCC TGACGGGTTC GGTGGCCGAT GCCGAAGACG CCGTGCAGGA TGCCTGGCTG
CGGTGGGATG CGCTGGGGGA GGACTGGTCC GGCATCGCCG ATCTGCGCGC GTGGCTGACG
ACGGTGGTCA GCCGCATCGG CCTCGACCGG TTGCGGTCGG CCGCCCGGCG GCGGGAGACC
TACGTCGGCG AATGGCTGCC CGAACCCGTC GTCACGGGAT TGGACCGCAC CGATCCGTTG
TCGGCGGTGG TCGCCGCCGA GGACGCCCGG TTCGCGGCGA TGGTGGTGCT CGACCGGTTG
ACGCCCGACC AGCGGGTGGC GTTCGTCCTG CACGACGGCT TCGCGGTGTC GTTCACCGAG
ATCGCCGGCG TCCTCGGGGT GAACCCCGCC GCGGCCCGTC AACTCGCGTC GCGGGCCCGC
CGGGCCGTCG CCGATGCCGA GGCACCCGCC CGCGACCCGT CCCACGACGA GGTCGTGGGC
CGGCTGATGG CGGCGATGGC AGCGGGTGAC ATGGCCGCCG TCGTTGAACT GCTGCACCCC
GACGTCACCT TCACCGGAGA CTCGAACCGT AAGGCGCCCA CCGCTCCTCG CGTCATCCAC
GGCGCCGACA AGGTGGCCAG GTTCGTCTTC GGGCTGGCCC GTCGCTACGG GCCGCGGTTC
TTCGAGGCGG GCGAGCTCGC ACTCGTCAAC GGCGACCTCG GCCTCTGCAC CGCGGGCCTG
CCCGCCGACG GTGAGTGGCC CGCGATGGCG CCGCGCATCC AGGCGCTGAC CGTGCGCGAC
GGCAAGGTGT GCGCGATCTG GGACGTCGCC AACCCGGACA AGTTCACGGC TTCGCCCATG
GCACCCGGCA GGCGTCGGTA CTGA
 
Protein sequence
MTASARIDEF ESLRPYLLSV GYRLTGSVAD AEDAVQDAWL RWDALGEDWS GIADLRAWLT 
TVVSRIGLDR LRSAARRRET YVGEWLPEPV VTGLDRTDPL SAVVAAEDAR FAAMVVLDRL
TPDQRVAFVL HDGFAVSFTE IAGVLGVNPA AARQLASRAR RAVADAEAPA RDPSHDEVVG
RLMAAMAAGD MAAVVELLHP DVTFTGDSNR KAPTAPRVIH GADKVARFVF GLARRYGPRF
FEAGELALVN GDLGLCTAGL PADGEWPAMA PRIQALTVRD GKVCAIWDVA NPDKFTASPM
APGRRRY