Gene Mmcs_1193 details

Gene Information

• Locus tag: Mmcs_1193
• ID: 4110030
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: +
• Start bp: 1292368
• End bp: 1292919
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638030314
• Product: pentapeptide repeat-containing protein
• Protein accession: YP_638361
• Protein GI: 108798164
• COG category: [S] Function unknown
• COG ID: [COG1357] Uncharacterized low-complexity proteins

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGAGT GGAACGACGA GGAGTTCATC GGCCGGGACT TCCGTGACGA GGACCTGAGC 
CGGCTGCGCA CCGAGCGGGT GGTGTTCGAC GGCTGCGATT TCAGCGGTGT CGACATGTCG 
GAGTCCGAGC ACGTCGGTTC CGCGTTCCGC AACTGCGTGT TCCGACGGGC GTCGCTGTGG 
CACAGCACAT TCCGTAACTG CAGCATGCTG GGTTCGGTGT TCACCGAGTG CCGGCTGCGG 
CCACTGACGC TGGTCGAGGT GGACCTGACG CTCGCCGTGC TCGGCGGATG CGATCTGCGC 
AAGGTCGACC TGTCGGACTG CCGGCTGCGC GAAGCCGGCC TGGTCGGCGC GGATCTGCGC 
GAGGCGGTGC TGCAGCGTGC CGACCTGCGC GGCGCCCGCG TGCAGAACAC CCGTTTCGAG 
GGTGCGGATC TACGCGGTGC GCGCATCGAC GCGACGCTGT GGACCACCGC CGCGGTGCGC 
GGGGCGCGCA TCGACATCGA GCAGGCACTG GCATACGCCG CCGCGCACGG CCTCGACGTG 
CACGGCGGGT GA 

 

Protein sequence

MAEWNDEEFI GRDFRDEDLS RLRTERVVFD GCDFSGVDMS ESEHVGSAFR NCVFRRASLW 
HSTFRNCSML GSVFTECRLR PLTLVEVDLT LAVLGGCDLR KVDLSDCRLR EAGLVGADLR 
EAVLQRADLR GARVQNTRFE GADLRGARID ATLWTTAAVR GARIDIEQAL AYAAAHGLDV 
HGG