Gene Mmcs_1183 details

Gene Information

• Locus tag: Mmcs_1183
• Symbol: dnaE2
• ID: 4110020
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: +
• Start bp: 1280478
• End bp: 1283777
• Gene Length: 3300 bp
• Protein Length: 1099 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638030304
• Product: error-prone DNA polymerase
• Protein accession: YP_638351
• Protein GI: 108798154
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0587] DNA polymerase III, alpha subunit
• TIGRFAM ID: [TIGR00594] DNA-directed DNA polymerase III (polc)

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGTTTCT CCAACGGGCC GACATGGCCG GAGATCGAGC GGGTCTTGAA CGGCAAGCCC 
CGCCGCGCCG GGGAGTCTCT GCGCGAACCT CCCGGTGACG GCGGTGACAG CCCGGCGTGG 
TCGCGTAAAC GCGGCGCCTA CCAGGCTCCG CAGTTGCCGC GCTCGGGCGG CGCGGTGCCG 
TACGCCGAAC TGCACGCCCA CTCGGCGTAC AGCTTCCTCG ACGGCGCAGG CACCCCGGAG 
GAACTCGTCG AGGAGGCCGC CCGCCTTGAC CTGCGGGCCA TCGCGCTGAC TGACCACGAC 
GGGCTCTACG GGGTCGTCCG GTTCGCCGAG GCCGCCAGGG AACTCGACAT GCGCACGGTG 
TTCGGCGCCG AACTGTCGCT GGGCATGGGC GCGCGCTCCG CAAGAAATGA GGTGCCCGAT 
CCACCGGGCC CCCACCTGCT GGTGCTGGCC CGCGGACCCG AGGGCTACCG CCGGCTGTCG 
CGCGAGATCG CCAAGGCGCA TCTGGCCGGG GGCGAGAAGG GAAAGCCCCG CTACGACTAC 
GACACGCTCA CCGAGGCCGC CGGCGGGCAC TGGCACATCC TCACCGGCTG CCGCAAAGGC 
CATGTCCGCC AAGCTCTCTC GGAGGGCGGC CCGGCGGCGG CCGAGAAAGC CCTCGCCGAC 
CTGGTGGACC GGTTCGGCCG CGACCGGGTC AGCGTGGAGC TGACCCACCA CGGCCACCCC 
CTCGACGATG AACGCAACGC CGCGCTGGCC GAGCTGGCAC CACGCTTCGG CCTGACCGTC 
GTGGCCACCA CCGCAGCGCA TTTCGCCGAA CCGTCACGCG GCAGGCTGGC GATGGCGATG 
GGCGCGATCC GGGCCCGTCA CTCGATCGAC GAGGCCGCGG GCTACCTCGC CCCGCTCGGT 
GGTTCGCATC TGCGCTCGGG GGAGGAGATG GCCCGGCTGT TCGCGCACTG CCCGCAGGTC 
GTCACCGCCG CCGCCGACCT GGGGGAGCAG TGCGCGTTCG GGCTGGCGCT GATCGCCCCG 
AAACTGCCGC CGTTCGACGT GCCCGCCGGG CACACCGAGG ACAGCTGGCT GCGGCATCTG 
GTGATGCTCG GCGCCCGCAA CCGCTACGGC CCGCCGGAAC GGGCGCCGCA GGCCTACGCG 
CAGATCGAGC ACGAGCTGCG GGTCATCGAA AAGCTGTCCT TCCCCGGCTA TTTCCTCGTC 
GTCCACGACA TCACCCGGTT CTGCAAGGAG AACGGCATCC TCGCCCAGGG GCGGGGTTCG 
GCGGCCAACT CCGCGGTCTG CTACGCGCTG GGGGTGACCA ACGTCGACCC GGTCGCCAAC 
GAGCTGTTGT TCGAACGGTT CCTGTCCCCG GCCCGTGACG GGCCGCCCGA CATCGACATC 
GACATCGAAT CCGATCTGCG TGAGCAGGCG ATCCAGTACG TCTACGACCG CTACGGCCGT 
GACTACGCCG CCCAGGTCGC CAACGTCATC ACCTACCGCG GCCGCAGCGC CATCCGGGAC 
ATGGCCCGGG CGCTCGGCTT CTCCCAGGGG CAGCAGGACG CCTGGAGTAA ACAGCTCAGC 
AAGTGGAACG GGCTGGCCGA CTCACCGGAC ATCGAGGGCA TTCCCGAGCC GGTGGTCGAT 
CTGGCGTTGC AGATCTCGAA TCTGCCGCGG CACATGGGCA TCCACTCAGG AGGCATGGTG 
ATCTGCGACC GGCCGATCGC CGACGTGTGC CCGGTCGAGT GGGCCCGCAT GGCCAACCGC 
AGCGTGCTGC AGTGGGACAA GGACGACTGC GCGGCCATCG GCCTGGTGAA GTTCGACATG 
CTCGGGCTCG GCATGCTCTC GGCGCTGCAC TACTGCATCG ACCTGGTGCG TGAACACAAG 
GGCCTCGACG TCGACCTGGC CAAGCTGGAC CTGTCCGAAC CCGCCGTCTA CGAGATGCTG 
CAGCGCGCCG ATTCGGTCGG CGTGTTCCAG GTGGAGTCCC GGGCGCAGAT GGCCACGCTG 
CCGCGTCTGA AACCGCGGGT GTTCTACGAC CTGGTGGTCG AGGTCGCGCT GATCCGGCCG 
GGGCCGATCC AGGGTGGGTC GGTGCACCCG TACATCAAGC GTCGCAACGG CGAAGAGCCC 
GTCACCTACG ACCACCCGTC GATGGCGAAC GCGCTGCGAA AGACGCTGGG GGTGCCGCTG 
TTCCAGGAGC AGTTGATGCA ACTGGCCGTC GACTGCGCCG GGTTCACCGC CGCCGAGGCC 
GACCAACTGC GCCGCGCCAT GGGGTCGAAG CGGTCGACGG AGAAGATGCG GCGGCTGCGG 
GGCCGGTTCT ACGACGGTAT GCGCCAACGG CACGGCATCA CCGGCGAGGT GGCCGACCGG 
ATCTACGACA AGCTGGAGGC GTTCGCGAAT TTCGGCTTCC CCGAAAGCCA TTCGCTGTCC 
TTCGCCTCGC TGGTGTTCTA CTCGTCATGG TTCAAGCTGC ACCACCCGGC GGCGTTCTGC 
GCCGCGCTGC TGCGGGCGCA GCCGATGGGC TTCTACTCAC CGCAGTCGCT GGTGGCCGAT 
GCCCGCAGGC ACGGCGTCAC CGTGCACGGC CCCGACGTGA ACGCCAGCCT CGCGTACGCG 
ACGCTGGAGA GCGCCGGGAC CGAGGTGCGG CTCGGGCTCG GCGCCGTCCG CCACATCGGT 
GACGACCTCG CCGAGCGGAT CGTCGAAGAG CGAAAAGCCA ACGGCCCCTT CGAAAGCCTG 
CTGGATCTCA CCGGCCGGGT GCAGCTCTCG GTGCCGCAGA CCGAGGCGCT GGCCACCGCG 
GGTGCGCTGG GCTGTTTCGG CGTCACCCGC CGCGAGGGGC TGTGGGCGGC AGGCGCGGCG 
GCCGCCGAAC GGCCGGACCG GCTGCCCGGG GTGGGGTCGG CCGGGCAGGT CCCGTCGTTG 
CCCGGGATGA GCAAGCTCGA ACTGGCCGCC GCCGACGTCT GGGCGACGGG GGTGTCCCCG 
GACAGCTATC CCACCCAGTT CCTGCGCGAG AACCTCGACG CGATGGGCGT CGTCCCCGCG 
GGCCGGCTCC TCGATGTGCC CGACGGCACC CGGGTGCTGG TCGCCGGGGC GGTGACACAC 
CGGCAGCGCC CGGCCACCGC CCAGGGGGTG ACGTTCCTCA ACCTCGAGGA CGAGACGGGG 
ATGGTCAACG TGGTGTGTTC ACCGCAACTC TGGTCACGGC AGCGACGCCT GGCCCAGACC 
GCGCCGGCGA TGGTGATCCG CGGCATCGTG CAGAACGCGA CCGGTGCGGT CACCGTCGTC 
GCCGACAAAC TCGGCAAGCT CGACATGCGG GTCGGGTCGA AGTCGCGCGA CTTCCGCTAA 

 

Protein sequence

MGFSNGPTWP EIERVLNGKP RRAGESLREP PGDGGDSPAW SRKRGAYQAP QLPRSGGAVP 
YAELHAHSAY SFLDGAGTPE ELVEEAARLD LRAIALTDHD GLYGVVRFAE AARELDMRTV 
FGAELSLGMG ARSARNEVPD PPGPHLLVLA RGPEGYRRLS REIAKAHLAG GEKGKPRYDY 
DTLTEAAGGH WHILTGCRKG HVRQALSEGG PAAAEKALAD LVDRFGRDRV SVELTHHGHP 
LDDERNAALA ELAPRFGLTV VATTAAHFAE PSRGRLAMAM GAIRARHSID EAAGYLAPLG 
GSHLRSGEEM ARLFAHCPQV VTAAADLGEQ CAFGLALIAP KLPPFDVPAG HTEDSWLRHL 
VMLGARNRYG PPERAPQAYA QIEHELRVIE KLSFPGYFLV VHDITRFCKE NGILAQGRGS 
AANSAVCYAL GVTNVDPVAN ELLFERFLSP ARDGPPDIDI DIESDLREQA IQYVYDRYGR 
DYAAQVANVI TYRGRSAIRD MARALGFSQG QQDAWSKQLS KWNGLADSPD IEGIPEPVVD 
LALQISNLPR HMGIHSGGMV ICDRPIADVC PVEWARMANR SVLQWDKDDC AAIGLVKFDM 
LGLGMLSALH YCIDLVREHK GLDVDLAKLD LSEPAVYEML QRADSVGVFQ VESRAQMATL 
PRLKPRVFYD LVVEVALIRP GPIQGGSVHP YIKRRNGEEP VTYDHPSMAN ALRKTLGVPL 
FQEQLMQLAV DCAGFTAAEA DQLRRAMGSK RSTEKMRRLR GRFYDGMRQR HGITGEVADR 
IYDKLEAFAN FGFPESHSLS FASLVFYSSW FKLHHPAAFC AALLRAQPMG FYSPQSLVAD 
ARRHGVTVHG PDVNASLAYA TLESAGTEVR LGLGAVRHIG DDLAERIVEE RKANGPFESL 
LDLTGRVQLS VPQTEALATA GALGCFGVTR REGLWAAGAA AAERPDRLPG VGSAGQVPSL 
PGMSKLELAA ADVWATGVSP DSYPTQFLRE NLDAMGVVPA GRLLDVPDGT RVLVAGAVTH 
RQRPATAQGV TFLNLEDETG MVNVVCSPQL WSRQRRLAQT APAMVIRGIV QNATGAVTVV 
ADKLGKLDMR VGSKSRDFR