Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1170 |
Symbol | |
ID | 4110007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 1266077 |
End bp | 1267852 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638030291 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_638338 |
Protein GI | 108798141 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCCTG ACTACGACGT CCTCATCATC GGTTCGGGGT TCGGTGGCAG CGTCACCGCG CTGCGGCTCA CCGAGAAGGG CTATCGGGTC GGCGTACTCG AAGCGGGCCG CCGCTTCGCC GACGAGGACT TCGCCAAGAC GTCGTGGGAT CTGCGGAACT TCCTGTGGGC GCCGCAACTG GGCTGCTTCG GCATCCAGCG CATTCATCTG CTCCGCGACG TCCTCATCCT GGCCGGCGCG GGTGTCGGCG GCGGATCGCT CAACTACGCC AACACCCTCT ACGTCCCGCG TGAGCCGTTC TTCAACGACC CGCAGTGGAA GCACATCACC GACTGGAACG AAGAGCTGCT GCCGCACTAC GAGCAGGCCC AGCGGATGCT CGGCGTGGTC ACGAACCCGA CGTTCACCGA CGCCGACCGC GTCGTGAAGG AAGTCGCCGA GGACATGGGC GTCGGCGACA CCTTCGTCCC GACGCCGGTG GGCGTGTTCT TCGGCCCCGA CGGGCAGAAG GCCCCGGGCA AGACGGTGCC CGACCCCTAC TTCGGCGGTG TCGGCCCGGC CCGCAGGGGT TGCATCGAGG TCGGCGAATG CATGACGGGC TGCCGCCACA ACGGCAAGAA CACCCTGGTG AAGAACTACC TCTACCTCGC CGAGCGGGCG GGCACCGAGG TACATCCGCT GACCACCGTG ACCAGCTTCG AACAGCGCGC CGACGGCGTC TGGGAGGTGA GCACCGTGCG CACCGGCCGC AAGGTGCGCC GCCAGAAGCG CACCTTCACC GCCAACCATG TCGTCCTTGC GGCGGGCACG TTCGGCACTC AGAAGCTGCT GTTCAAGATG CGTGACGCCG GGAAGCTCCC CGAGCTGTCC GACCGGCTGG GCATGCTGAC CCGGACCAAC TCGGAATCCA TCGTCGGCGC CGGGAAATTC GAGGTCACCG ACGACCTCGA CCTCACCCAC GGCGTGGCGA TCACTTCGTC GATCCACCCG ACCTCCGACA CCCACATCGA ACCGGTGCGC TACGGCAAGG GCTCCAATGC GATGGGGCTG CTGCAGACAC TGATGACCGA CGGCGCCGGC CCGGAGGGCA CCGACGTGCC GCGCTGGAAG CAGCTGTTCC ACAACGCCAA AGCGGATCCG CGCGGCACCA TGCGACTGCT CAACGTGCGG CGCTGGAGCG AACGGACGCT GATCGCGCTG GTCATGCAGA ACCTCGACAA CTCCATCACC ACCTTCACCA AGCGCACGAA GTTCGGCACC CGCCGGCTGA CGAGCAAACA GGGCCACGGT GAGCCGAACC CGACGTGGAT CCCGGTGGGC AACGAGGTGA CGCGGCGGAT CGCCGAGAAG ATCGACGGCG TCGCGGGCGG CACCTGGGGC GAATTGTTCA ACATCCCCCT GACGGCACAC TTCCTCGGCG GCGCCGCCAT CGGCGACAGC GCCGAGCACG GAGTCATCGA CCCCTACCAC CGCGTCTACA ACTATCCGAC GCTGTACGTC ACCGACGGGG CGGCGATCTC GGCCAACCTC GGCGTCAACC CGTCCCTGAC CATCAGCGCA CAGGCGGAAC GGGCGGCCTC GCTGTGGCCG AACAAGGGCG AAGAGGATCT GCGACCCGCA CAGGGCGAGG GGTACCGCCG CCTGGACCCG ATCCGCCCTG CGCAGCCCGT GGTGCCCGCC GGTGCGCCCG CGGCCCTGGA CTGGAACGCC AGCCGCGAGG AGGTCAACCG CCGCGACCCC ACCACCGCCG AGGCTTCCGA GGCGCGCGGC GCCTGA
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Protein sequence | MQPDYDVLII GSGFGGSVTA LRLTEKGYRV GVLEAGRRFA DEDFAKTSWD LRNFLWAPQL GCFGIQRIHL LRDVLILAGA GVGGGSLNYA NTLYVPREPF FNDPQWKHIT DWNEELLPHY EQAQRMLGVV TNPTFTDADR VVKEVAEDMG VGDTFVPTPV GVFFGPDGQK APGKTVPDPY FGGVGPARRG CIEVGECMTG CRHNGKNTLV KNYLYLAERA GTEVHPLTTV TSFEQRADGV WEVSTVRTGR KVRRQKRTFT ANHVVLAAGT FGTQKLLFKM RDAGKLPELS DRLGMLTRTN SESIVGAGKF EVTDDLDLTH GVAITSSIHP TSDTHIEPVR YGKGSNAMGL LQTLMTDGAG PEGTDVPRWK QLFHNAKADP RGTMRLLNVR RWSERTLIAL VMQNLDNSIT TFTKRTKFGT RRLTSKQGHG EPNPTWIPVG NEVTRRIAEK IDGVAGGTWG ELFNIPLTAH FLGGAAIGDS AEHGVIDPYH RVYNYPTLYV TDGAAISANL GVNPSLTISA QAERAASLWP NKGEEDLRPA QGEGYRRLDP IRPAQPVVPA GAPAALDWNA SREEVNRRDP TTAEASEARG A
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