Gene Mmcs_1112 details

Gene Information

• Locus tag: Mmcs_1112
• Symbol: rpsD
• ID: 4109950
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: +
• Start bp: 1210306
• End bp: 1210911
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 638030234
• Product: 30S ribosomal protein S4
• Protein accession: YP_638281
• Protein GI: 108798084
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCGTT ACACCGGACC CGCCACCCGC AAGTCGCGCC GCCTCGGCGT CGACCTCGTC 
GGTGGTGATC AGTCGTTCGA GAAGCGCCCC TACCCGCCCG GCCAGCACGG TCGCGCGCGG 
ATCAAGGAGA GCGAATACCG CACCCAGCTG CAGGAGAAGC AGAAGGCCCG CTTCACCTAC 
GGCGTGCTGG AGAAGCAGTT CCGTCGCTAC TACGACGAGG CCAACCGGCA GCCCGGCAAG 
ACCGGCGACA ACCTGCTGCG TATCCTCGAG AGCCGGCTGG ACAACGTCGT GTACCGCGCC 
GGCCTGGCGC GCACCCGCCG GATGGCCCGC CAGCTCGTCA GCCACGGCCA CTTCACCGTC 
AACGGCGTGA AGGTCGACAT CCCCAGCTAC CGGGTGTCGC AGTACGACAT CATCGACGTG 
CGCGAGAAGT CGCTGAACAC CGATCCGTTC GTGATCGCGC GGGAGACCGC GGGTGACCGG 
CCGATCCCGT CGTGGCTGCA GGTCGTCGGC GAACGTCAGC GCATCCTCGT CCACCAGCTG 
CCCGAGCGCG CGCAGATCGA CGTGCCGCTC ACCGAGCAGC TGATCGTCGA GCTCTACTCG 
AAGTAA 

 

Protein sequence

MARYTGPATR KSRRLGVDLV GGDQSFEKRP YPPGQHGRAR IKESEYRTQL QEKQKARFTY 
GVLEKQFRRY YDEANRQPGK TGDNLLRILE SRLDNVVYRA GLARTRRMAR QLVSHGHFTV 
NGVKVDIPSY RVSQYDIIDV REKSLNTDPF VIARETAGDR PIPSWLQVVG ERQRILVHQL 
PERAQIDVPL TEQLIVELYS K