Gene Mmcs_1065 details

Gene Information

• Locus tag: Mmcs_1065
• ID: 4109904
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: -
• Start bp: 1161538
• End bp: 1162125
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638030188
• Product: dTDP-4-dehydrorhamnose 3,5-epimerase
• Protein accession: YP_638235
• Protein GI: 108798038
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
• TIGRFAM ID: [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.646153
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGCGC GGGAGCTGGC GGTACCCGGC GCATGGGAGA TCACCCCGAC CGTGCACGCG 
GATTCGCGTG GGTCATTCAT GGAGTGGTTC ACCGACCGCG AGTTCACCGC GTTCGCCGGC 
CACCGCCTCG ATGTCCGGCA GGCCAACTGT TCGGTGTCGA GGGCAGGCGT GCTGCGCGGT 
CTGCACTTCG CGGCGGTGCC GCCGGGTCAG GCGAAGTACG TCACCTGTGT GCGCGGGGCG 
GTGTTCGACG TGGCCGTCGA CATCCGGGTC GGCTCCCCCA CCTTCGGGCG CTGGGATGCG 
GTGCTGCTCG ACGACCGCGA CCGCCGATCG ATCTACCTGT CGGAGGGCTT GGGGCACGCT 
TTCCTTGCGC TGCAGGATGA TTCGACCGTG ATGTACCTGT GCTCGACGGG TTACGACCCG 
GCCCGCGAGC ACACGGTGTC GCCCACCGAT CCGGCGCTGG GCATCGAGTG GCCCTTCGAC 
GGTGAGCTGG TGCTGTCCGA TCGTGACGCC GCGGCCCCGA CGCTGGATCA GGCGCGCGAC 
GCCGGCCTGC TCCCGACGTG GGATGCCTAC CTGGCGCTGC CGAGATAA 

 

Protein sequence

MSARELAVPG AWEITPTVHA DSRGSFMEWF TDREFTAFAG HRLDVRQANC SVSRAGVLRG 
LHFAAVPPGQ AKYVTCVRGA VFDVAVDIRV GSPTFGRWDA VLLDDRDRRS IYLSEGLGHA 
FLALQDDSTV MYLCSTGYDP AREHTVSPTD PALGIEWPFD GELVLSDRDA AAPTLDQARD 
AGLLPTWDAY LALPR