Gene Mmcs_1050 details

Gene Information

• Locus tag: Mmcs_1050
• ID: 4109889
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: +
• Start bp: 1147852
• End bp: 1148571
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638030173
• Product: putative transmembrane anti-sigma factor
• Protein accession: YP_638220
• Protein GI: 108798023
• COG category: [K] Transcription
• COG ID: [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor)

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGAAG CTCTGGGCGA TCCCTATCTG CAATGGGACG CCGCCTACGT GCTTGGCTCG 
TTGTCCAGCG CCGATCGGCG CGAGTTCGAG GCGCACATGC AGACCTGCGA CCGGTGTCGG 
GCGGCCGTCG CCGAGCTCAG CGGCATACCC GCCCTGTTGT CGATGCTCGA CGCCGACGAA 
GTCGACGGTC AACTCGACGG CGACGAGCCC GAACCGCCGC CGCTGCGGCC CGAGGTGCTG 
GATTCGGTAC TCGACAAGGT CAAATGGCGC AGGCGCCGGT CGCGGTGGAT GACGTCGGCG 
GCGGTGGGAT TGGCGGCCGC AGTGCTCGCC GTCGGGCTGG TCATCGCGAT CCGTCCGGGC 
GCCGTCGGAA TGCAGAACGG CACGCCGGAG GTGACCGCGG CGACCTACGA GATGACCAAG 
CTCGCGCCGA CACCGTTCAA CGCGACCGTG AGCCTGTCCG ATTTCGGCTG GGGCACCCGT 
ATCGACATGG CCTGCACGTA CGGCCAATGG TCCGGCGGCG GGCCCGCCGC GCCGCCGAGC 
CGGCTGGGCA TGGTGGTGGT CGGCCGCGAC GGCACCCGCT CGGAGATCGC GACGTGGCTG 
GGACTGTCCG GCGCGACGGC CCTGCCGAGC GGCAACACCA CGCTGCACCG CGACGACATC 
GCTGCGGTGC AGCTGGTCGC GGCCGACACC CGTGAGGTGC TGCTCGAGAA GACGCTGTGA 

 

Protein sequence

MIEALGDPYL QWDAAYVLGS LSSADRREFE AHMQTCDRCR AAVAELSGIP ALLSMLDADE 
VDGQLDGDEP EPPPLRPEVL DSVLDKVKWR RRRSRWMTSA AVGLAAAVLA VGLVIAIRPG 
AVGMQNGTPE VTAATYEMTK LAPTPFNATV SLSDFGWGTR IDMACTYGQW SGGGPAAPPS 
RLGMVVVGRD GTRSEIATWL GLSGATALPS GNTTLHRDDI AAVQLVAADT REVLLEKTL