Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1049 |
Symbol | |
ID | 4109888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 1147355 |
End bp | 1147855 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638030172 |
Product | RNA polymerase sigma factor SigL |
Protein accession | YP_638219 |
Protein GI | 108798022 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGATC CGGAAGCCAC GATGATGCGC GTGCTCTACG ACGAGCACGC CGATGCATTG TGGCGGTACG CGCTCAAACT GACCGGTGAC GCCGCGACCG CCGAGGATGT CGTCCAGGAG ACGCTGCTGC GGGCCTGGCG GCACCGGCCG AACGGGTCGG CGCGGGCCTG GTTGTTCACC GTGGCCCGCA ATCTGGTGAT CGACGAGCGG CGCAGCGCGC GCTACCGCCG CGAGGCCGGG ACCCCGGACG TCGACACCGT GGCGCAGCCC AGCGAACCGG ACAAGGTGGA CTCCGCGCTG GACCGGATGC TGATCGGCTC GGCGCTCGCG CAGTTGTCCG AGGACCACCG GGCGGTCGTC CGGCGCGCGT ACTACCAGGG GTGGACGACG GGGCAGATCG CGGCGGAACT CGAGATCCCG GAGGGGACCG TGAAGTCCCG GCTGCACTAC GCCGTGCGGG CGTTGCGACT GAACCTGCAG GAGATGGGGG TGACGCGATG A
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Protein sequence | MDDPEATMMR VLYDEHADAL WRYALKLTGD AATAEDVVQE TLLRAWRHRP NGSARAWLFT VARNLVIDER RSARYRREAG TPDVDTVAQP SEPDKVDSAL DRMLIGSALA QLSEDHRAVV RRAYYQGWTT GQIAAELEIP EGTVKSRLHY AVRALRLNLQ EMGVTR
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