Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1030 |
Symbol | rplF |
ID | 4109869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 1129635 |
End bp | 1130174 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638030153 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_638200 |
Protein GI | 108798003 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000375476 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCGTA TTGGAAAGCA GCCGGTTCCG GTTCCCGCCG GAGTCGATGT GACGATCGAA GGTCAGAACG TATCGGTGAA GGGGCCCAAG GGCACTCTGT CGCTGGCGGT CGCCGAGCCG ATCGTCGTGG CGCGTGATGA CGAGGGCGCC ATCGTGGTGA CCCGGCCCAA CGACGAGCGG CGCAACCGCT CGCTGCACGG GCTGTCCCGC ACCCTGGTGG CCAACCTGGT CGAGGGCGTC ACGCAGGGAT ACACCACCAA GATGGAGATC TACGGCGTCG GTTACCGCGT CGCGCTCAAG GGTTCCAACC TGGAGTTCGC GCTCGGTTAC AGCCACCCCG TGGTCATCGA GCCGCCGGAG GGCATCACCT TCGCGGTCGA GACGCCCACG AAGTTCTCGG TCTCGGGTAT CGACAAGCAG AAGGTCGGCC AGATCTCGGC GATCATCCGC CGTCTGCGCC GCCCCGACCC GTACAAGGGC AAGGGCGTGC GTTACGAGGG TGAGCAGATC CGCCGCAAGG TCGGAAAGAC AGGTAAGTAA
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Protein sequence | MSRIGKQPVP VPAGVDVTIE GQNVSVKGPK GTLSLAVAEP IVVARDDEGA IVVTRPNDER RNRSLHGLSR TLVANLVEGV TQGYTTKMEI YGVGYRVALK GSNLEFALGY SHPVVIEPPE GITFAVETPT KFSVSGIDKQ KVGQISAIIR RLRRPDPYKG KGVRYEGEQI RRKVGKTGK
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