Gene Mmcs_1027 details

Gene Information

• Locus tag: Mmcs_1027
• Symbol: rplE
• ID: 4109866
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: +
• Start bp: 1128377
• End bp: 1128940
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 638030150
• Product: 50S ribosomal protein L5
• Protein accession: YP_638197
• Protein GI: 108798000
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0094] Ribosomal protein L5

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00000321161
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTACCG CAGAGAAGAC CCTCCCGCGC CTCAAGCAGC GCTACCGCGA GGAGATCCGC 
GAGTCGCTGC AGCAGCAGTT CGGCTACGCC AACGTGATGC AGATCCCGGG CGTCGTGAAG 
GTCGTCGTCA ACATGGGTGT CGGTGACGCC GCCCGCGACG CGAAGCTGAT CAACGGCGCG 
GTCAACGACC TCGCGCTGAT CACCGGCCAG AAGCCGGAGA TCCGTCGCGC CCGCAAGTCC 
ATCGCCCAGT TCAAGCTGCG CGAAGGTATG CCGATCGGTG CCCGCGTGAC CCTGCGCGGC 
GACCGCATGT GGGAGTTCCT CGACCGCCTG GTCGCGATCG CGCTGCCGCG TATCCGCGAC 
TTCCGCGGCC TGAACCCCAA GCAGTTCGAC GGCACCGGCA ACTACACCTT CGGCCTGACC 
GAGCAGTCGA TGTTCCACGA GATCGACGTG GACAGCATCG ACCGCCCGCG CGGTATGGAC 
ATCACCGTCG TCACCTCGGC GACGACCGAC GACGAAGGAC GAGCGCTGTT GCGGGCGCTG 
GGCTTCCCCT TCAAGGAGAA CTGA 

 

Protein sequence

MTTAEKTLPR LKQRYREEIR ESLQQQFGYA NVMQIPGVVK VVVNMGVGDA ARDAKLINGA 
VNDLALITGQ KPEIRRARKS IAQFKLREGM PIGARVTLRG DRMWEFLDRL VAIALPRIRD 
FRGLNPKQFD GTGNYTFGLT EQSMFHEIDV DSIDRPRGMD ITVVTSATTD DEGRALLRAL 
GFPFKEN