Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_0900 |
Symbol | |
ID | 4109741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 995384 |
End bp | 998731 |
Gene Length | 3348 bp |
Protein Length | 1115 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638030022 |
Product | DNA helicase/exodeoxyribonuclease V, beta subunit |
Protein accession | YP_638072 |
Protein GI | 108797875 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.274913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGAAAC AAATGCGCGA TCCGCTCCGC TCCTCGCTGG ACTTTGACCT GCTCGGCCGG CTGCCTGCGC CCCTCACCAC GACGGTGCTG GAGGCGAGTG CGGGCACCGG CAAGACGTTC GCGCTCGCGG GTCTGGTGAC GCGGTACATC GCCGAGGGTG CAGCGACGCT CGACCAGATG CTGCTCGTGA CGTTCGGCCG GGCGGCCAGT CAGGAACTGC GGGAGCGGGT GCGCTGTCAG ATGCTCGACG CGCTGGTCGC CTTCGAGGAC CCGTCGACCG TCGGCGACAA CCAACTCGTC GAGCACCTGA TCGACGCCCC CGACGACGAA CGGCACCTGC GCAAGCAGCG GCTGAAAGAC GCGTTGGCCG GTTTCGACGC CGCCACCATC GCCACCACGC ATCAGTTCTG CCAGCTGGTC CTGAAATCGC TTGGCGTGGC CGGGGATACG GATACCGGTG TGCAGCTCGT GGAGAGCCTC GACGACCTGA CCGCCGAGAT CGTCGACGAT CTGTACCTCG CCCACTTCGG CCAGCAGCGT GACGATCCGG TGATGACCCG CGGTCAGGCG CTGGAGCTCG CCCGCGAGGT CGTCGGCAAC GCCGGCACCG AACTGCGGCC GCAGAACCCG CCGCCCGAGA CGGAGGCCGC GGCGCGCGTC GAGTTCGCCA AGGCGGTGTG CGCCGAACTC GAGCGACGGA AACGCCGGCT CGGCATCCTG CACTACGACG ATCTGCTGTC CCGGCTGGCC AACGCGCTCA CCGGCGAGGA TTCCCCGGCC CGCACCCGCA TGCACCGCCG CTGGTCGATC GTGATGGTCG ACGAGTTCCA GGACACCGAT CCGGTGCAGT GGCAGGTGCT CGACCGGGCG TTCACCGGGC GTTCGACGCT GATCCTGATC GGCGATCCCA AACAGGCGAT CTACGCGTTC CGCGGCGGCG ACATCGCCAC CTACCTGCAC GCCGCGAGCA CGGCCGGCCA CCGGCAGACC CTCGGCACGA ACTGGCGCAG CGACGGCGAT CTGGTCGACC GGCTGCAGGT CGTCTTGCGC GACGCCGAAC TCGGCGACCC CGAGATCGTG GTGCGCCCCG TCGAGGCCCG GCACAAGGGC CACCGGCTCG CGGGGGCACC GCACAACGAT CCCTTCCGCC TGCGCATCGT CTCCCGCGAC ACCTTCGGCA TCCGCGGCGA CCGCACCATC CCAATCGACA GGCTGCGACC GCACATCAGC GCCGACCTCG CCGCCGACAT CGGCCGTCTG CTGGCCAGCG GAGCGACGTT CTGCGACAAG AAGATCGAAG CCAAGGACAT CGCGGTGATC GTCGAGAAAC ACAAGGACGC CCGCGCCTGC TTCGACGCGC TCTCGGTGGC CGGCATCCCC GCGGTCTACA CCGGGGACTC CGACGTGTTC AACTCCCCCG CGGGTGACGA CTGGCTGTGC CTGCTCGAGG CGTTCGACCA GCCGCACCGC TCCGGACTGG TGCGCGCCGC GGCCACCACG ATGTTCTTCG GCCGCACCGC CGAAGAGCTC GCCGCGCGGG GCGACCGGCT CACCGACGAG ATCGCCGACC GGTTGCGCGA GTGGGCCGAT CACGCCCGCG AGCGCGGCGT CGCCGCCATC TTCGAGGCGG CCAACATGAC CGGTATGGGC AGGCGGGTGC TGTCCTGGCG CGACGGGGAG CGCCACATGA CCGACCTCGC CCACCTGACG CAGGTGCTGC ACGAGACCGC GCACCGCGAA CACTTCAACC TGCCCGCCCT GCGGGACTGG CTGCGCACCC AACGCGAGGA GCGCAGCGGC GCCACCGAAC GCAACCGCCG CCTCGACAAC GACGCCGCGG CCGTGCAGAT CATGACGGTC TGGGTCAGCA AGGGTCTGCA GTATCCGGTG GTGTACCTGC CGTTCGCGTT CAACCGCAAC ATCCAGACCC GCGACTGCGT GCTGTTCCAC GACGACCGCA CCCGCTGTCT GCACATCGGC GGCGACGACA GCCCCGACCA CGCACAGGTC GAACGGCTCG GCCGCAAGGA GGCCGCCGGC GACGACATAC GCCTCACCTA CGTCGCGCTG ACCCGGGCGC AGTCCCAGGT GGTCGCCTGG TGGGCGCCGT CGTGGGACGA ACCCAACGGC GGGCTGTCCC GGCTGCTGCG CGGGCGCGCC CCCGGGGAGA CGACCGTCCC GGACCGCTGC GACCCGCCGA AACTCGACGA TGCGGACGCC AGGACGGCGT TGCGCGCCTG GGCGGATCTC GGCGGCCCGG TGCTCGAGGA CTCCGAGATC GCCGCACCCG CCGCACCCGA GCTCCGCGAG CACCCGACGG ATCTCGACGT GCGGCACTTC CACCGCGGCA TCGACACCGC GTGGCGACGC ACGTCGTACT CGGGCCTGCT GCGGGCCGCC GAGGGCTCGC CGGCCGTCGC CGGGGTGACC AGCGAGCCCG AGGTCGGTGA ACTCGACGAC GAGGCCGCCG AGGTGCCGGT CAGCGAGAGC CACACCGACG TCGACCCGGT GCCGTCGCCG ATGGCGGAGC TGCCGACGGG TGCGAAGTTC GGGTCGCTGG TGCACGCGGT GCTCGAACAC GCCGATCCGT TCGCCGCCGA CCTGAAGGCC GAACTCGAGC ACAGGATCCG CGAACACATG GTGTGGTGGC CGGTCGACGT CGAGGCCGAG GCGCTGGCCG ACGCGCTGCT GCCGATGCAC GACACCCCGC TCGGCCCCCT CGCCCCCAAC GTGACACTGC GGCAGATCGG GCCGCGGGAT CGACTGCGGG AGTTGGACTT CGAGTTCCCG TTGGCCGGCG GCGACGTGCG CGGGGGTGCA CCGGCGATCA CGCTGGCCGA TGTCGGCCGC CTACTCGGCG CGCACCTGCC CGCCGACGAC CCGATGACGC CGTACGTCGA CCGGCTCACC GACCGGGCGC TGGGCGGCCA GTCGCTCAAG GGGTACCTGA CGGGTTCGAT CGACGTGGTC CTGCGCGTCC GTGACACCAC CGGGGTGCGC TACGTGGTGG CCGACTGGAA GACGAACTGG CTCGGTGAAC GCGAAAAACC CCTGACCGCC GCCGATTACA GCCGCACCCG GATGGCCGAA GCGATGCTGC ACTCGGACTA TCCGCTGCAG GCCCTGCTGT ATTGCGTTGT CCTGCACCGG TTCCTGCGGT GGCGGCAACC GGGTTACGAT CCGGCGAAGC ATCTCGGCGG GGTGCTGTAC CTGTTCGTGC GCGGGATGTG CGGGGCGTCC ACACCGGTGG TCGACGGCGA TCCGACCGGG GTGTTCAGCT GGCGGCCGCC CGCTTCGCTG ATCGTGGCGC TGTCCGATCT GCTCGACGCC GGCGCCGCGG CGGCCTGA
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Protein sequence | MRKQMRDPLR SSLDFDLLGR LPAPLTTTVL EASAGTGKTF ALAGLVTRYI AEGAATLDQM LLVTFGRAAS QELRERVRCQ MLDALVAFED PSTVGDNQLV EHLIDAPDDE RHLRKQRLKD ALAGFDAATI ATTHQFCQLV LKSLGVAGDT DTGVQLVESL DDLTAEIVDD LYLAHFGQQR DDPVMTRGQA LELAREVVGN AGTELRPQNP PPETEAAARV EFAKAVCAEL ERRKRRLGIL HYDDLLSRLA NALTGEDSPA RTRMHRRWSI VMVDEFQDTD PVQWQVLDRA FTGRSTLILI GDPKQAIYAF RGGDIATYLH AASTAGHRQT LGTNWRSDGD LVDRLQVVLR DAELGDPEIV VRPVEARHKG HRLAGAPHND PFRLRIVSRD TFGIRGDRTI PIDRLRPHIS ADLAADIGRL LASGATFCDK KIEAKDIAVI VEKHKDARAC FDALSVAGIP AVYTGDSDVF NSPAGDDWLC LLEAFDQPHR SGLVRAAATT MFFGRTAEEL AARGDRLTDE IADRLREWAD HARERGVAAI FEAANMTGMG RRVLSWRDGE RHMTDLAHLT QVLHETAHRE HFNLPALRDW LRTQREERSG ATERNRRLDN DAAAVQIMTV WVSKGLQYPV VYLPFAFNRN IQTRDCVLFH DDRTRCLHIG GDDSPDHAQV ERLGRKEAAG DDIRLTYVAL TRAQSQVVAW WAPSWDEPNG GLSRLLRGRA PGETTVPDRC DPPKLDDADA RTALRAWADL GGPVLEDSEI AAPAAPELRE HPTDLDVRHF HRGIDTAWRR TSYSGLLRAA EGSPAVAGVT SEPEVGELDD EAAEVPVSES HTDVDPVPSP MAELPTGAKF GSLVHAVLEH ADPFAADLKA ELEHRIREHM VWWPVDVEAE ALADALLPMH DTPLGPLAPN VTLRQIGPRD RLRELDFEFP LAGGDVRGGA PAITLADVGR LLGAHLPADD PMTPYVDRLT DRALGGQSLK GYLTGSIDVV LRVRDTTGVR YVVADWKTNW LGEREKPLTA ADYSRTRMAE AMLHSDYPLQ ALLYCVVLHR FLRWRQPGYD PAKHLGGVLY LFVRGMCGAS TPVVDGDPTG VFSWRPPASL IVALSDLLDA GAAAA
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