Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_0885 |
Symbol | |
ID | 4109726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 978028 |
End bp | 978819 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638030007 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_638057 |
Protein GI | 108797860 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.553708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCGC GTCTGGTGCT CGTCGCCGCC GTGATCGTGA CGTTGGTGCC GCTGGCCTAC CTGCTGTCGC TGGCGGTGCG CCCGGCCGAG GATGTGCTGA ACTCGTCGCT GTTGCCGACG TCGGTGACGG TCGACAACTT CGTCAGGGTC TTCGACACCA TCGCGCTCGG CACCATGCTG GCCAATTCGT GGGTCTCGGC GGTCGGCGCG GCGCTGCTGG CCGTCGTGAT CGCCGCGCCC GCAGCGTATT TCACCGCCCG TCACACCCGC GGTGACCGGC TGCTGACCGT GCTGCTCGCC AGCTACTGCG CCCCGCCGAT CGTCGCGATC ATCCCGCTGT TCTTCCTGTT GCGCCACGCC GGGCTGACCA ATAGCGTCGG CGGGCTGATC CTCGTCAACG GCATCGCCGG CGTCCCCGTC GCGGTGTGGC TGCTCGACGG GTTCGTTCGC CGCATCCCGA TCGAGATCGA CGAGGCCGCC GTCATCGACG GTCTGACCGT CGCCGCGGCG TTCCGCAGGG TGGTGCTGCC ACTGCTGTGG CCGGGCATCG TCGCGGCGCT GCTGGTGGTG TTCTTCCTGA GCTACAACGA CTTCCTGTTC GCCGTCTACC TCGCCGTCAC CAAGGAGAGC CAGACGCTGA CGGTCGGCCT GTCGCTTTTC CAGGGCGATC GCAACGTGCA GTTCGGCCAG CAGGCCGCCG CCGGACTGCT CGGCGTCCTC CCCGTCTACG TGCTGGCGCT CGCGGCGCAG CGCTACCTCG TCGGCGGCCT CACCACGGGA GCGACCAAGT GA
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Protein sequence | MKARLVLVAA VIVTLVPLAY LLSLAVRPAE DVLNSSLLPT SVTVDNFVRV FDTIALGTML ANSWVSAVGA ALLAVVIAAP AAYFTARHTR GDRLLTVLLA SYCAPPIVAI IPLFFLLRHA GLTNSVGGLI LVNGIAGVPV AVWLLDGFVR RIPIEIDEAA VIDGLTVAAA FRRVVLPLLW PGIVAALLVV FFLSYNDFLF AVYLAVTKES QTLTVGLSLF QGDRNVQFGQ QAAAGLLGVL PVYVLALAAQ RYLVGGLTTG ATK
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