Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_0780 |
Symbol | |
ID | 4109625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 837334 |
End bp | 840099 |
Gene Length | 2766 bp |
Protein Length | 921 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638029906 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_637956 |
Protein GI | 108797759 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGTGG TTCGGGACAC GCCGGCCGGA CGGTCAGCCG TCGCGGAGTT CCTCGCTGCG GTCGCCGACG GGCCCTCCGG ACTACTCCTC GAAGGGGAAG CCGGGATCGG TAAGACCCGC CTGTGGCTCA CCGCAATCGA AGAGGCACGC CGGCGGGGAT ACCGGGTGTT GTCCGCGCGC GCGGGTCAGG CCGAGACGTC ATTGGCCTAC TCCGTGGTCG CCGACCTCCT CGAAGACGTC GACGCGGCCG TCACCGAGGA CCTTCCCGAA GTTCAGCGCC TCGCCCTGGA CCGGCTGCTG ATCCGCGGCG ACGCCGACGG TCCCCAGACC GACCACCGGG TGGCCGCCGC GGCCGTCCTG AACACTGTCG AGATCCTGTG CCGCGACCAA CCCCTGATCC TGGCCATCGA CGACGTGCAG TGGGTCGACG TGTGCAGCCG CGAGGTGATC GGTCTGGTCG CGCGGCGGTT GGACTGCCAG GTGGGTCTGC TGCTCACCGA GCTGAGCGAG GAACCCGGGC ACCACACCGA GTGGCTGCAG CTGAGCCACC CCGACCGGCT GCACCGCCAC CACGTCGCGC CGCTCACCCT GGGCGGCCTG CACGCGATGC TCAGCGAGCG GCTCGGCCGC TCGTTCCCGC GACCCACCCT GATCCGCATC GCGGAGACCT CCGGCGGAAA CCCGCTCTAC GCGCTCGAAC TCGCACGCGC CATCTCAGAG CAGACCGCCG CGGGTGAGCC CGCCCTGCCT CCGTCACTGG CCGACGTCGT GCGCCGGCGC ATCCAGGGCA TCGACGAGGT GGTGCGCGAC GTCCTACTCG CCGCCGCCTG CGTCGCCGCG CCGACCGTCG ACCTCGTGGC CAGCGCCACC GAGAAGACCC CCGAGGACGT GCTCGAACTC CTCGAAGCCG CCGAGGACCA GGGTCTGGTC GAGATCGAGG GAACGACAAT ACGATTCGCC CACCCTCTGC TGGCGCGGGG CGTGTACTCC GAGGCCGGGC CGGCCCGGCG CCGCCACATG CACCGGCGGC TCGCGGGTGT GATCTCCCAA CCGGAGCAGA AGGCCCGCCA CCTGGCACTC GCGGCGACCA GCCAAGACGA CGACACGCTG GCCGCCCTCG ATGCGGCCGC CGATGCGGCC CGCGCCCGCG GCGCCCCGGC CGCCGCCGCC GAACTGCTCG AGTTCGCGAT GCGACTCGGC GGGGACACCG ATCTGCGCCG CCTGCAGGCC GCCGCGCACT ACTTCACCGC CGGCGACAGC TGGCGCGCAG GGGAACTGCT CACCGCCACG CTGCCCCGGA TGCCGCACGG TCCGCTGCGC GCCATGGCCT CCATGCAACT CGCCGGAATC GTCATGGACC GCAACGACTT CCAGCGCGGA CTACAACTGC TCGACGAAGC ACTCGCCGAC AGCGAGTCCG ACCAGACCCT GCAGGTGTAC TGCCTGCTGA TGCTCGGAAT GGCCCAGACG AACACCGGTG ATCACGAGGA TTCCCTGCGC AATGCCCAAC GCGCGGTCGA GATCGCCGAG CAGACCGGTC AGGACCAGTT GATCGGGCAG GCCCTGGCGG TGCGGGTCTT CACGCGTTTC GTGTTCGGGT TCGGTCTCGA CGACCGGGAC ATGCAACGTG CACTCGACTA CGAGGACCCG GATGCCGAGG TGCCGTTGCC TTTTCGGGCC CGGGCCATAG CCGGCCTGAT CGACTCGTGG ACAGGGCGCC TCGACGAGGC GTACGCCACG ATGCAGGACC TGCGGCGCGG GAGCCTCGAC CGGGGCGCCG ACCGCGACCT GCTCGCGTTG TCGGTGAGCG GCACCCTGGT CGAACTCTGG CGCGGCCGGC TCGACGAGGC CGCCACCTAC GCCGACGACG CCGTCGAGCG CGCCGAACAG GTCGGAGGTG ACAACTCCCG GCTGGTGGCG CTGGGTATGC GGGCGATCGT CGGCGGCTAT GCGGGCCGGG TCCGCGCAGC GCGCGCCGAT GCCGAAACCG CGCTGGCGAT GGCGCGGCGC AGCGGCGTCA TGCGGATGAC GTGGTGGCCA CTCGGCGTGC TGGTCTTCCT CGAGGTGTCG CTGGGCAACT ACTCCCAGGC CCTCACCACG CTGGAGCCCC TGTTGGCCGA CTATCTGGCC ACCCCGGGCA ACGAGATCTT CGGTTCCTTC TTCGTCCCCG ACGCCGTCGA AGCGCTGGTG GCGGTGGGAC GACATACCGA TGCGCAGTCC CTCATCGAGA GATTCGAGGA CGACGGCCAG CGCCTCGACC GCCCGTGGTT GTCGGCGGTG GCCGGACGCG GGCGCGCCAT GGAGCTGGCC GCGCGCGGTG ACCTCGACGG TGCGGTCGCC GCGGTCACCA CGGCGATGGC CCACCACGAG CGTGTGCCGA TGCCCTTCGA AACCGCGCGC ACCGCACTGC TTCTCGGACA GCTGCAGCGC AGACAGCGAC GCAAGGAGGC GGCCGCCGCG ACACTGCGTG AGGCGCTGCG GACGTTCGAG GACATCGGCA CGGTCCTGTG GGCGCAACGC GCACGCGACG AGCTGGCCCG GGTCAACGTA CGCCCCACCC GCGATCAGAG CCTCACCCCG TCAGAGCGTC GTGTCGCCGA ACTGGCCGCG TCCGGGGTCA GCAACCGCGA CATCGCCGCG ACCCTGTTCA TCAGCATCAA GACCGTCGAG GCCAACCTCG GACGTGTCTA CCGCAAGCTC GGCGTGCGCG GACGCGTCGC GCTCGCGCGC CGTCTCGAAG AGCTCAGCGG CGACGAAGGA CGCTGA
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Protein sequence | MDVVRDTPAG RSAVAEFLAA VADGPSGLLL EGEAGIGKTR LWLTAIEEAR RRGYRVLSAR AGQAETSLAY SVVADLLEDV DAAVTEDLPE VQRLALDRLL IRGDADGPQT DHRVAAAAVL NTVEILCRDQ PLILAIDDVQ WVDVCSREVI GLVARRLDCQ VGLLLTELSE EPGHHTEWLQ LSHPDRLHRH HVAPLTLGGL HAMLSERLGR SFPRPTLIRI AETSGGNPLY ALELARAISE QTAAGEPALP PSLADVVRRR IQGIDEVVRD VLLAAACVAA PTVDLVASAT EKTPEDVLEL LEAAEDQGLV EIEGTTIRFA HPLLARGVYS EAGPARRRHM HRRLAGVISQ PEQKARHLAL AATSQDDDTL AALDAAADAA RARGAPAAAA ELLEFAMRLG GDTDLRRLQA AAHYFTAGDS WRAGELLTAT LPRMPHGPLR AMASMQLAGI VMDRNDFQRG LQLLDEALAD SESDQTLQVY CLLMLGMAQT NTGDHEDSLR NAQRAVEIAE QTGQDQLIGQ ALAVRVFTRF VFGFGLDDRD MQRALDYEDP DAEVPLPFRA RAIAGLIDSW TGRLDEAYAT MQDLRRGSLD RGADRDLLAL SVSGTLVELW RGRLDEAATY ADDAVERAEQ VGGDNSRLVA LGMRAIVGGY AGRVRAARAD AETALAMARR SGVMRMTWWP LGVLVFLEVS LGNYSQALTT LEPLLADYLA TPGNEIFGSF FVPDAVEALV AVGRHTDAQS LIERFEDDGQ RLDRPWLSAV AGRGRAMELA ARGDLDGAVA AVTTAMAHHE RVPMPFETAR TALLLGQLQR RQRRKEAAAA TLREALRTFE DIGTVLWAQR ARDELARVNV RPTRDQSLTP SERRVAELAA SGVSNRDIAA TLFISIKTVE ANLGRVYRKL GVRGRVALAR RLEELSGDEG R
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