| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_0748 |
|---|
| Symbol | |
|---|
| ID | 4109593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 794280 |
|---|
| End bp | 795017 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638029873 |
|---|
| Product | ThiJ/PfpI |
|---|
| Protein accession | YP_637924 |
|---|
| Protein GI | 108797727 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.958247 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGA TCGCGATCGT GCTCTACCCC GGCTTCACCG CCCTCGACTT CATCGGCCCC
TACGAGGTGC TGCGCAGCCT GCCCGACACC GAGATCCGTT TCGTCTGGCA CGAACCCGGA
CCCGTCACCG CGGACTCCGG TGTGCTCGTC GTCGGCGCCA CCCACTCGTT CGACGAGACC
CCCTCACCCG ACATCGTGCT GGTGCCCGGC GGCCCGACCT CCGGCGAACA CGCCCGGGAC
GAGAAGCTGC TCGCCTGGAT CCGCGCCGCG CACGCGACCA CCACGTGGAC GACGTCGGTG
TGCACGGGGT CGATGATCCT CGCCGCGGCC GGGGTGCTCG ACGGCAGGCG CGCCACCTCC
CACTGGATGG CGGTCCCGCT GCTCAAGCCC TTCGGTGTCA CCCCCGTCGG TGACGAACGC
GTGGTGCGGG ACGGCAAGGT CGTCACCGCC GCGGGCGTCT CGGCGGGCCT CGACTTCGCG
CTGTGGCTGT CCGCGCAGCT CGCCGGCGAG GCGCAGGCCA AGGTCCGGCA GCTCATCCTC
GAGTACGACC CGCAGCCGCC GTTCGACTCC GGCCATGTGT CGAAAGCGTC GGCCGTGACG
AAGGCCGCCG CCACCGCGGC GCTGGGCAAG GACACCTTCG TCACCCACCG CCAGCTCGCG
CCGTCGGCGA AGCTGCTGTG GGACACCGCG CTGCAGGCCG TCCGCGCGCG CAACCACCGC
CGGAAGGCGT CTGCCTAG
|
|---|
| Protein sequence | MTQIAIVLYP GFTALDFIGP YEVLRSLPDT EIRFVWHEPG PVTADSGVLV VGATHSFDET
PSPDIVLVPG GPTSGEHARD EKLLAWIRAA HATTTWTTSV CTGSMILAAA GVLDGRRATS
HWMAVPLLKP FGVTPVGDER VVRDGKVVTA AGVSAGLDFA LWLSAQLAGE AQAKVRQLIL
EYDPQPPFDS GHVSKASAVT KAAATAALGK DTFVTHRQLA PSAKLLWDTA LQAVRARNHR
RKASA
|
|---|
| |