| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_0747 |
|---|
| Symbol | |
|---|
| ID | 4109592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 793303 |
|---|
| End bp | 794268 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638029872 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_637923 |
|---|
| Protein GI | 108797726 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.46918 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGAT CCGTGCTGAT CGTCGGGTTC CCCGGCATCC AGGCACTCGA CCTCGTCGGC
CCGTTCGAGG TGTTCACCGG CGCCTCCCGC TACCTGGCGA CCAACGGCGG GGGCGGCTAC
CACGTCACGG TCGGCTCGCT CGGCGGCCGG CCCGTCACCA CCGGGACCGG GCTCACGCTG
GCCGCCGAAC CGCTGCCGAA GCCGGACACC CCGCTCGACA CGCTCGTCCT GCCCGGCGGC
CAAGGCACCC AGACCGCCGT CGCCGACACC GAACTCATCG CCTGGGTGCG CGCCGCCGCC
CCGCACGCCC GCCGCGTCGT CACCGTCTGC ACCGGCGCCT TCCTCGCCGC CGAGGCCGGT
CTGCTCGACG GTTGCCCCGC CACCACCCAC TGGGCCTACG CCGATGCCTT CGCCAAGCGA
TACCCCGCCG TCGCCGTCGA CCCGGACCCC ATCTTCATCC GCAGTTCACC GAGGGTGTGG
ACGGCCGCAG GCGTCACCGC CGGCATCGAC CTCGCACTCG CGCTCGTCGA GGACGACCAC
GGCACCGAGG CCGCGCAGAC CGTCGCCCGG TGGTTGGTGA TGTACCTGCG CCGGCCGGGC
GGACAGACCC AGTTCGCCGC ACCGGTGTGG ATGCCACGCG CCAAACGTGC CCCGATCCGC
GACGTCCAGG AGGCCATCGA GGCCGAACCC GGTGGCGCGC ACAGCATCGC CGAACTGGCG
CAGCGCGCGG CGATGAGCCC ACGCCACTTC ACCCGGGTGT TCAGCACCGA GGTCGGCGAG
GCCCCCGGCG CCTACGTCGA ACGCGTCCGG ACCGAGGCCG CGCGCCGCCA ACTCGAGGAG
ACCGACGACA CCGTCACCGC GGTCGCCGCC CGCTGCGGCT TCGGAACCGC AGAGACCATG
CGCCGCAACT TCATCCGACG ACTCGGCGTC TCACCCGATC ACTACCGCAA GACGTTCACC
GCCTGA
|
|---|
| Protein sequence | MTRSVLIVGF PGIQALDLVG PFEVFTGASR YLATNGGGGY HVTVGSLGGR PVTTGTGLTL
AAEPLPKPDT PLDTLVLPGG QGTQTAVADT ELIAWVRAAA PHARRVVTVC TGAFLAAEAG
LLDGCPATTH WAYADAFAKR YPAVAVDPDP IFIRSSPRVW TAAGVTAGID LALALVEDDH
GTEAAQTVAR WLVMYLRRPG GQTQFAAPVW MPRAKRAPIR DVQEAIEAEP GGAHSIAELA
QRAAMSPRHF TRVFSTEVGE APGAYVERVR TEAARRQLEE TDDTVTAVAA RCGFGTAETM
RRNFIRRLGV SPDHYRKTFT A
|
|---|
| |