| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_0738 |
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| Symbol | |
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| ID | 4109583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | - |
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| Start bp | 783382 |
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| End bp | 784632 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638029863 |
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| Product | RNA polymerase ECF-subfamily sigma factor |
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| Protein accession | YP_637914 |
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| Protein GI | 108797717 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.481415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTTTCTG ACATCCAGCA GACCGTCGAC GCGGTGTGGC GGATGGAGGC CGCCAAGATC
GTCGCCACGC TCACCCGCAC CGTCGGCGAC GTCGGCTTGG CCGAGGATCT CGCCGCCGAC
GCCCTCGTCG ACGCCCTCAC CCAGTGGCCG TCGACCGGCG TGCCGAACAA CCCGGGCGCC
TGGCTGACCA CCGTCGCCAA ACGCAAGGCG ATCGACCACT GGCGGCGGCG CGACAACCTC
GACGCGAAGT ACACCGAACT GGCCCGCGAC CTCGAAACCC ACCTCGACGA ACCCGCCTGG
GACCCCGACC ACATCGACGA CGACGTCCTG CGGCTCATCT TCATCGCGGC CCACCCGGTG
CTGTCGCGGG AGAACCAGAT CGCGCTGACC CTTCGCGTCA TCGGCGGCCT GACCACCGAG
GAGATCGCCA GGGCCTTCCT GACGCCGAAA GCCACGGTGG CCCAACGCAT CGTGCGGGCC
AAGAAGACAC TGGCCGACGC GGAGGTCCCG TTCGAGGTGC CGCCCCGCGA GCAGTACCCG
CAACGCCTGT CGGCGGTGTT GAGCGTCATC TACCTCATCT ACAACGAGGG GTATTCGGCG
TCCTCCGGGC AGCGTTGGAT CCGCGACGAA CTGTGCCGCG AGGCGCTGCG CCTGGGCCGC
GTCCTCGCCG CGCTGGTGCC CGACGAACCC GAGGCCCACG GGCTGGTGGC GCTGATGGAA
CTGCAGAGCT CGCGGTTCGC GGCCCGTACC GACGACGCGG GCCGCCCGAT CCTGCTCGAG
GACCAGGACC GGACGAAATG GGACCGCGCC CAGATCGGCC GGGGCGTCGC GGCGCTGCGG
CGTGCGGTGG CGGCCATCGA CCGGCGAGGC ACCGGGTGGG GCCCGTACGC GCTGCAGGCC
GCGCTCGCCG AATGCCACGC CACCGCACCG TCGACCGCCG AGACCGACTG GCGGCGCATC
GTGACCATCT ACGACGCGCT GCTGCAGATC ACGCCCTCGG CCGTCGTCGA ACTCAACCGC
GCCGTGGCCG TCGCGATGGC CGACGGGGCC GCCGCCGCGC TCGAGATCGT CGACGGGATC
ACCGGGCTCG CCGACTCCTA TCTATTGCCC AGCGTGCGCG GCGAACTGCT GGCCCGCCTG
GGCCGCGCCG ACGAGGCCGC CGCTCAGTTC GACCGGGCCG CCGCACTCGC CGACAACGAG
CGCGAACGAG ACGTGTTGTC CGACAAAGCC GCCCGGGTAC GCCAGAGGTG A
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| Protein sequence | MVSDIQQTVD AVWRMEAAKI VATLTRTVGD VGLAEDLAAD ALVDALTQWP STGVPNNPGA
WLTTVAKRKA IDHWRRRDNL DAKYTELARD LETHLDEPAW DPDHIDDDVL RLIFIAAHPV
LSRENQIALT LRVIGGLTTE EIARAFLTPK ATVAQRIVRA KKTLADAEVP FEVPPREQYP
QRLSAVLSVI YLIYNEGYSA SSGQRWIRDE LCREALRLGR VLAALVPDEP EAHGLVALME
LQSSRFAART DDAGRPILLE DQDRTKWDRA QIGRGVAALR RAVAAIDRRG TGWGPYALQA
ALAECHATAP STAETDWRRI VTIYDALLQI TPSAVVELNR AVAVAMADGA AAALEIVDGI
TGLADSYLLP SVRGELLARL GRADEAAAQF DRAAALADNE RERDVLSDKA ARVRQR
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