Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_0528 |
Symbol | |
ID | 4109374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 583903 |
End bp | 584766 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638029654 |
Product | short chain dehydrogenase |
Protein accession | YP_637705 |
Protein GI | 108797508 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAACA TCAGGGGCAA GACCATCGCG ATCACCGGCG CCGCTCGCGG TATCGGTTAT GCCACTGCGA AGGCTCTGCT CGCCCGCGGC GCCCGCGTCG TCATCGGCGA TCGCGACGTG GCGCTGCAGG AGTCGGCGGT CGCCCAGTTG ACCAAGCTGG GCCCGGTGTC GGGCTACCCG CTCGACGTCA CCGACCGTGA GTCGTTCGCG ACGTTCCTCG ACAAGGCGCG CACCGACGGC GGCGGGCACA TCGACGTGTT GATCAACAAC GCCGGCGTCA TGCCGATCGG CCCGTTCCTC GAACAGTCCG AACAGGCGAT CCGGTCGTCG ATCGAGGTCA ACCTCTACGG CGTGATCGCC GGATGCCAGC TGGCGCTGCC CGACATGGTC GCTCGCGGGC GTGGTCACAT CATCAACATC GCCTCGCTGT CCGGGGTGAT TCCCGTGCCC GGTCAGGTGG TCTACGTCGG CGCGAAGTTC GGTGTGGTGG GCTTGTCGGC GGCGCTGGCC GACGAGGTGG CACCGCACGG CGTGCACGTG TCGGTGGTGA TGCCGCCCTT CACCCGCACC GAGCTGATCT CGGGCACGAA GGAGTCCGGG GCGATCAAAC CGGTCGAACC GGAGGACATC GCGGCGGCGA TCGTCAAGAC GCTGGACAAG CCCAAGACGC ACGTGTCGGT ACCGCCGGCC CTGCGGTTCA CGGCCCAGGC GGCCCAGTTG CTCGGACCGC GCGGGCGACG CTGGCTGAAC AAGAAGCTCG GTCTGGACAA CGTGTTCCTC GACTTCGACA CCGCCAAGCG CAAGAGCTAC GAGGACCGCG CGCAGACGGC GCTCGGTGTG GTCGAGTCCG GCGACAGGAC CTAG
|
Protein sequence | MDNIRGKTIA ITGAARGIGY ATAKALLARG ARVVIGDRDV ALQESAVAQL TKLGPVSGYP LDVTDRESFA TFLDKARTDG GGHIDVLINN AGVMPIGPFL EQSEQAIRSS IEVNLYGVIA GCQLALPDMV ARGRGHIINI ASLSGVIPVP GQVVYVGAKF GVVGLSAALA DEVAPHGVHV SVVMPPFTRT ELISGTKESG AIKPVEPEDI AAAIVKTLDK PKTHVSVPPA LRFTAQAAQL LGPRGRRWLN KKLGLDNVFL DFDTAKRKSY EDRAQTALGV VESGDRT
|
| |