Gene Mmcs_0486 details

Gene Information

• Locus tag: Mmcs_0486
• ID: 4109332
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: +
• Start bp: 540794
• End bp: 542635
• Gene Length: 1842 bp
• Protein Length: 613 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 638029612
• Product: Na+/H+ antiporter NhaA
• Protein accession: YP_637663
• Protein GI: 108797466
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [P] Inorganic ion transport and metabolism
• COG ID: [COG1651] Protein-disulfide isomerase; [COG3004] Na+/H+ antiporter
• TIGRFAM ID: [TIGR00773] Na+/H+ antiporter NhaA

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.913429
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCGAGG CGTCCGCGCG CACCATCGGA CCGCTGCCCA GCCGCTTCAG CCGGGACCCC 
AAGACCCCGC GGTCGACCGA CAACGCCGCG GCCGCCCTGC TGCTGGCCTT CACCGTGCTG 
GCGATACTGT GGGCGAATTC GCCTTGGGCG CAGAGCTATT CGATATTCTG GGATACCGAT 
GTCGCGGTGA GCTTCGGTGA GTACCGCGCC GAGTTGTCGG TCAAACACCT CGTCAACGAC 
GGCCTGATGG CGTTCTTCTT CTTCATCGTG GGACTGGAGG TCAAGAGCGA GTTCGTGATC 
GGCGAACTGA CCGACCGGTC GCGGGCAGCG GTGCCCGTCG TCGCGGCGAT CGCCGGGCTG 
ATCGTGCCCG CGGTCATCTT CCTCACCTTC AACCCCTCCG GACCCGACGC CCAGGCGTGG 
GGTGTCGTCA TCTCCACCGA CACCGCCTTC CTCGTCGGCG CGTTGGCGGT GATCAAACCC 
AAATTCCCCG CGCGCCTTCG GATCTTCCTG CTGACGCTGG CGGTCGTCGA CGACGTCGGG 
GCGCTCGGCG CGATCGCGCT GTTCTACACC GACGACCTGA AACTCGCGCC GCTGGCGGTC 
GCGGCGCTGC TCATCGCCGC GCTGGCCATG GTGCGCAGGC TGCCGTCGCT GCGCGGACCG 
GCCTACGCCG TCCTGGGTTT CGCGCTGTGG ATCGCGCTGT ACCTCGCACA CGTGCACCCG 
ACGCTGGCCG GTGTGGCCGT GGCCGTGCTC ATCCCGGTCT TCACCCCCGA GCGCCGACAG 
GTCGAACAGA CCGTCGACCT CGTCCGGGCG TTCCGCCAGT CACCGAACCC GCAGTACGCC 
CGGGCGGTGA CACGCGGTCT GCGCGAGTCG ATCTCGATCA ACGAGCGGTT GCAGACCGCG 
GTCGGGCCCT ATGTGTCGTT CGTGGTGCTG CCGATCTTCG CCCTCGCCAA CGCCGGCGTG 
CACCTCGACG AGCAGACCAT CACCGCGGCG ATGAGCTCGA CGCTCACGTG GGGCATCGTG 
GCCGGACTGG TGGTCGGGAA GTTCGTCGGG ATCACCGCGG CCACCGCGCT GATGAGCGCC 
ACCGGCTGGG GTCAGCTCGC GCCGGGGCTC TCGCTGCGGC GGGTGGCCGG CGGTGCGGCG 
CTGTCCGGGA TCGGTTTCAC CATCTCGCTG TTCATCGTCG ACGTCGCGAT CGAGGACCCG 
GCCCGCCAGG ACGAGGCCCG CGTCGGCGTG CTGATCGCCT CGGTCCTGGC GTTCACGTTG 
AGCTGGGCGC TGTTTCGCAT CACCGATTGG ATCAGCCCAC CCGAACCCGT CGGACTCACC 
CTCGTACGTC CGGTCGATCC GGAGCGCGAC CACATCCGCG GCGATCCGGA CGCACCGCTG 
GTCCTCGTCG AGTACGGCGA CTACGAATGC CCGTTCTGCG GCCGCGCGAC CGGAGCGATC 
GACGAGGTGC GCACCCACTT CGGCGACGAC CTGCTCTACG TGTGGCGCCA TTTCCCGCTG 
GAACGCGCGC ACCCGCGGTC GTTCGACGCC GCCCGCGCCA GCGAGGGCGC CGCAGCGCAG 
GGCAAGTTCT TCGAGATGGG CCGCGAGTTG TTCGCCCATC AGGACGATCT GGAGTGGTCC 
GACATGTACC GCTACGCGGT CGCGATCGGC CTCGACATCG AGCAGTTCGA CCAGGACGTG 
CGCGTCCACG CCTCGAAGGT GCTGCACCGG GTGCGCGACG ACGCCCAGGA TGCGGAGGTG 
ATGGACCTCA ACTCCACACC TACGTTCTTC GTCAACGGCA AGCGACACAA GGGGCCGTGG 
GATGCGGCCA GCCTGATCCG TGCGCTGGAG GCGGGGCGTT AG 

 

Protein sequence

MTEASARTIG PLPSRFSRDP KTPRSTDNAA AALLLAFTVL AILWANSPWA QSYSIFWDTD 
VAVSFGEYRA ELSVKHLVND GLMAFFFFIV GLEVKSEFVI GELTDRSRAA VPVVAAIAGL 
IVPAVIFLTF NPSGPDAQAW GVVISTDTAF LVGALAVIKP KFPARLRIFL LTLAVVDDVG 
ALGAIALFYT DDLKLAPLAV AALLIAALAM VRRLPSLRGP AYAVLGFALW IALYLAHVHP 
TLAGVAVAVL IPVFTPERRQ VEQTVDLVRA FRQSPNPQYA RAVTRGLRES ISINERLQTA 
VGPYVSFVVL PIFALANAGV HLDEQTITAA MSSTLTWGIV AGLVVGKFVG ITAATALMSA 
TGWGQLAPGL SLRRVAGGAA LSGIGFTISL FIVDVAIEDP ARQDEARVGV LIASVLAFTL 
SWALFRITDW ISPPEPVGLT LVRPVDPERD HIRGDPDAPL VLVEYGDYEC PFCGRATGAI 
DEVRTHFGDD LLYVWRHFPL ERAHPRSFDA ARASEGAAAQ GKFFEMGREL FAHQDDLEWS 
DMYRYAVAIG LDIEQFDQDV RVHASKVLHR VRDDAQDAEV MDLNSTPTFF VNGKRHKGPW 
DAASLIRALE AGR