Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_0447 |
Symbol | |
ID | 4109293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 500092 |
End bp | 501951 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638029573 |
Product | hypothetical protein |
Protein accession | YP_637624 |
Protein GI | 108797427 |
COG category | [R] General function prediction only |
COG ID | [COG0699] Predicted GTPases (dynamin-related) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.276019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGAC CGAACGGCCC CCGCAACGTG GCCGATACGC GCAAGGTGGT CACCGAGCTC ATCGAGCACA CCACCAAGAT CGCCGAGGCG CAGGACCGCG GCGACCTGGT GGCGCGGCTG GCGCGCGCCC GCACCCGCAT CGGTGACCCG CAGATCCGGG TGGTGATCGC CGGGCAGCTC AAACAGGGCA AGAGCCTGCT GCTCAATTCA CTGCTCAACA TGCCGGTGGC CCGGGTCGGC GACGACGAGT CGACGGTCCT GGCCACCGTC GTGTCGTATG CCGAACAGCC GTCGGCGCGG CTGGTGGTGG CCCGTCCCGA CGGCGAGGAA CCCGAACTCG TCGAGATCCC GACCACCGAC CTCGGCAAGG ATCTGCGCCG CGCACCGCAG GCCGACGGCC GGGAGGTGCT GCGCGTGGAG GTGACGGTGC CCAGCCCGCT GCTCAAGGGC GGTCTGGCGT TCGTCGACAC CCCGGGTGTG GGCGGCCACG GCCAACCACA CCTCTCGGCG ACGCTGGGGC TGCTGCCCGA CGCCGACGCC ATGCTGATGA TCAGCGACAC CAGCCAGGAG TTCACCGAGC CGGAGATGAC CTTCATCCGC CAGGCGCTGG AGATCTGCCC GGTCGCCGCG ATCGTCGCGA CCAAGACCGA CCTGTATCCG CACTGGCGTC AGGTCGTCGA CGCCAACGCC GGCCACCTGC ACCGGGCGGG CATCACGACC CCCTTGATCC CCGCGTCGTC GACGTTGCGC AGCCACGCCG TCCAACTCAA CGACAAGGAA CTCAACGAGG AGTCCAACTT CCCGGCGATC GTGAAGTTCC TGTCCGAACA GGTGCTCGCC CGCAACACCG ACCGCGTCCG CGATCAGGTG GTCAACGAGA TCCGCGCCGC CGCCGAACAC CTCTCGATGG CCGTGCAGTC GGAGCTGTCC GCACTCGACG ATCCGGCGGC CGGCGGCACC CTGACCGCCG ACCTGGAGCG GCGCAAGAAG GAGGCGGAGG AGGCGCTGCA GCAGACCGCG CTGTGGCAGC AGGTGCTCAA CGACGGCATC GCCGACCTGA CCGCCGACGT CGACCACGAC CTGCGGCAGC GTTTCCGCAA CATCACCTTC CACACCGAGC GGGTCATCGA CGCAGGCGAC CCGACATTGC ACTGGGCCGA GATCGGTGCG GAACTCGAGG AGTCCGTGGC GACCGCCGTC GGCGACAACT TCGTCTGGGC CTACCAGCGG GCCGAGGCGT TGGCCGCCGA GGTCGCCCGC ACGTTCATGG AGGCCGGGTT GGACGCAGTG CGGATGCCCG CGATCGACGC CCGCGAGATG GGGGCGGAGT TCGGCGAGTT CCGGTCGCTG GCCCACCTGG AGGCCAAACC GCTCAAGATC GGCCACAAGA TCGTCACCGG GATGCGCGGC TCCTACGGCG GTGTGCTGAT GTTCGGCATG CTGACGTCGT TCGCCGGGCT CGGCATGTTC AACCCGCTGT CGCTCGGTGC CGGCTTCGTC CTCGGCCGCA AGGCCTACAA GGAGGACATG GAGAACCGGA TGCTGCGGGT GCGCAGCGAG GCGAAGACCA ACGTGCGCCG ATTCGTCGAC GACGTCGCAT TCGTGGTGGG CAAGGAATCG CGCGACCGGC TCAAGGGCAT CCAGCGTCAA CTGCGCGACC ACTACCGCGA GATCGCCAAC CAGACGACCC GCTCACTCAA CGAATCGCTG CAGGCCACGA TCGCCGCGGC CAGGCTGGCG GAGTCCGAAC GCAACGCCCG CACCAAGGAA CTGCAACGGC AACTCAACAT CCTGCGTCAG GTCATCGAGC ACGCCGAGAA ACTCGGCACG CCGACCGCGG CACCGGTCGC CGCGCCCTGA
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Protein sequence | MTRPNGPRNV ADTRKVVTEL IEHTTKIAEA QDRGDLVARL ARARTRIGDP QIRVVIAGQL KQGKSLLLNS LLNMPVARVG DDESTVLATV VSYAEQPSAR LVVARPDGEE PELVEIPTTD LGKDLRRAPQ ADGREVLRVE VTVPSPLLKG GLAFVDTPGV GGHGQPHLSA TLGLLPDADA MLMISDTSQE FTEPEMTFIR QALEICPVAA IVATKTDLYP HWRQVVDANA GHLHRAGITT PLIPASSTLR SHAVQLNDKE LNEESNFPAI VKFLSEQVLA RNTDRVRDQV VNEIRAAAEH LSMAVQSELS ALDDPAAGGT LTADLERRKK EAEEALQQTA LWQQVLNDGI ADLTADVDHD LRQRFRNITF HTERVIDAGD PTLHWAEIGA ELEESVATAV GDNFVWAYQR AEALAAEVAR TFMEAGLDAV RMPAIDAREM GAEFGEFRSL AHLEAKPLKI GHKIVTGMRG SYGGVLMFGM LTSFAGLGMF NPLSLGAGFV LGRKAYKEDM ENRMLRVRSE AKTNVRRFVD DVAFVVGKES RDRLKGIQRQ LRDHYREIAN QTTRSLNESL QATIAAARLA ESERNARTKE LQRQLNILRQ VIEHAEKLGT PTAAPVAAP
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