| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_0271 |
|---|
| Symbol | |
|---|
| ID | 4109117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 310486 |
|---|
| End bp | 311283 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638029396 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_637448 |
|---|
| Protein GI | 108797251 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACCC CCAAATCGGT ATTCATCACC GGCGCCGCCG CCGGCATCGG CCGCAAAACC
GCGATCGCGT TCGCCCGGAA GGGCTACACC GTCGGAGCGT TCGACATCGA CGAGGTCGGA
CTGAAGACGC TCACCGAGGA ACTCGACCGG GTGCAGACCC CCGTCGTCAC CGGTCACCTC
GACGTGACCG ACAGCGACGA GATGTCCCAG CGCATCGAGG AGTTCACCCA GGTCACCGGG
GGCCGCCTCG ACGTCCTGAT CAACAACGCG GGAATCCTTC GGGCCGGACG GTTCGAGGAA
CTCGACCTCG CCGGCCACTT CAAGGAGATC GACATCAACG CCAAGGGCGT GGTCAACGGT
CTCTACGCCG CGTTCCCGCA CCTGCGCAAC ACGCCCGGAT CGGTCGTCGT CAACCTCGCC
TCGGCCAGCG CGATCTACGG ACAGGCCGAA CTCGCGAACT ACAGCGCCAC CAAATTCTTC
GTGCGCGGCA TCACCGAAGC CCTCGACCTC GAATGGAACC GGTACGGCAT CCGGGTGATC
GCCATGTGGC CGCTCTACGT CCAGACGGCG ATGACCGACA ACATCAAGAC CGGCACCACC
GACTCGCTCG GCATCCGGTT GACCGCCCAG GACATCGCCG ACGCCATCGT CGCCGCCGTC
GAACCGACGG CACTCCGCCG CGCACTGCAC CAGGTGCACT TCCCCGTCGG CGCACAGTCG
AAGGTGCTCG CCACCGGCGC CCGCTTCTCA CCCGCATGGC TCACCAGGCT GGTCAACAAG
AAGCTGGCCC ACTCCTGA
|
|---|
| Protein sequence | MRTPKSVFIT GAAAGIGRKT AIAFARKGYT VGAFDIDEVG LKTLTEELDR VQTPVVTGHL
DVTDSDEMSQ RIEEFTQVTG GRLDVLINNA GILRAGRFEE LDLAGHFKEI DINAKGVVNG
LYAAFPHLRN TPGSVVVNLA SASAIYGQAE LANYSATKFF VRGITEALDL EWNRYGIRVI
AMWPLYVQTA MTDNIKTGTT DSLGIRLTAQ DIADAIVAAV EPTALRRALH QVHFPVGAQS
KVLATGARFS PAWLTRLVNK KLAHS
|
|---|
| |