Gene Mmcs_0259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_0259 
Symbol 
ID4109105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand+ 
Start bp300359 
End bp300730 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content71% 
IMG OID638029384 
Productnitrite reductase (NAD(P)H) large subunit, NirD 
Protein accessionYP_637436 
Protein GI108797239 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID[TIGR02378] nitrite reductase [NAD(P)H], small subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0272078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCTGC TCGACGACCG CAACGAGCTC AACGGGCCGC CGGATACGCG TTGGACGGTG 
GCCTGCCGCT ACGACTACCT CATCCCGTGC CGCGGCGTCG GGGTGCTCTT GCCCGACGGT 
GCCCAGGCGG CGCTGTTCCG TCTCGACGAC GGGAGCCTGC ACGCGATCGG CAACATCGAC 
CCCTTCTCCG GGGCGGCGGT GATGTCGCGC GGTATCACCG GCGACCGGGG CGGGCGGGCC 
ATCGTGCAGT CCCCGATCAA GAAGCAGGCC TTCGCCTTCG ACGACGGCAG CTGCCTCGAC 
GACCCGTCGG TGTCACTGCC GGTGTACCGG ACGCGGCGGA CCGCCGACGG GATCGTCGAG 
ATCGAGGCCT AG
 
Protein sequence
MTLLDDRNEL NGPPDTRWTV ACRYDYLIPC RGVGVLLPDG AQAALFRLDD GSLHAIGNID 
PFSGAAVMSR GITGDRGGRA IVQSPIKKQA FAFDDGSCLD DPSVSLPVYR TRRTADGIVE 
IEA