| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_0235 |
|---|
| Symbol | |
|---|
| ID | 4109081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 261773 |
|---|
| End bp | 262636 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638029360 |
|---|
| Product | RpiR family transcriptional regulator |
|---|
| Protein accession | YP_637412 |
|---|
| Protein GI | 108797215 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0836166 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCTC CCACCGGTGA GACCGTGGCC GCGTTGGCCG CCGCCGCGCT GCCGGCGTTG
TCGCGCGCCG AACGGCGGGT GGGTCGGGCG TTGCTGGCCG ACTATCCGAG CGCCGGGCTG
GCCAGTGCCG CGCGGCTCGC CGAACGGGCC GATGTCAGCC CTCCGACCGT ACTGAGGTTC
GCGCATTCGC TGGGCTTCGA AGGGTTCGCC GACCTGCAGG TCTCGCTGCG GGCCGAGATC
TCGGCGATGT CGAGCGGACC GATCACCCGG CTGCCGGACG CGCCCGCCGC GGGCAGCCCG
CTCGACCGGC TGCTCAATCA GGCCCGCGCG CAGAACGACC GCGCGTTGGA AACGCTCGCC
CACCTGCCGG GTTCGTCACT GGAGGCGGCG GTGGCCCTGC TGGCCGACCA GACGCGGCCG
CTCTTCCTGC ACGGCGGCCG GTTCTCGGTG CTGCTGGCCC ACCACCTGGG TGCGCACCTC
GAACAGCTGC GCCCGGGGGT GCGACTGCTC GCCGACCCGT CGGGCCGCGA CCTCGGGGCG
ATGATGGAAC TCACCCGGCG CGACGTGCTG GTCCTGTTCG ACTACCACCG CTACCAGGCC
AGCGCCGTGG ACGTGGCGGC GCGTTTCCAC CGGGCCGGGG CCGCGGTCGT GCTGATCACC
GACGACCTCG CCTGTCCGGT GGCCCCCGAC GCCGAAGTCG TGCTGGCCGC GTCGAGCACC
GTGGGGACGG TGTATCAGAG CATGGCGGCG GGGTTTCTGC TCACCGAACT GCTCCTCCCG
CTGGTGATGG AGGCGATCGG CGAACCCGCG CGCACCCGCA TGGCGCTGTG GGAGGAGCAG
CGCCGCGGCG AACTGCTGCC ATGA
|
|---|
| Protein sequence | MPSPTGETVA ALAAAALPAL SRAERRVGRA LLADYPSAGL ASAARLAERA DVSPPTVLRF
AHSLGFEGFA DLQVSLRAEI SAMSSGPITR LPDAPAAGSP LDRLLNQARA QNDRALETLA
HLPGSSLEAA VALLADQTRP LFLHGGRFSV LLAHHLGAHL EQLRPGVRLL ADPSGRDLGA
MMELTRRDVL VLFDYHRYQA SAVDVAARFH RAGAAVVLIT DDLACPVAPD AEVVLAASST
VGTVYQSMAA GFLLTELLLP LVMEAIGEPA RTRMALWEEQ RRGELLP
|
|---|
| |