Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_0230 |
Symbol | |
ID | 4109076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 255315 |
End bp | 256769 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638029355 |
Product | Orn/Lys/Arg decarboxylase, major region |
Protein accession | YP_637407 |
Protein GI | 108797210 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.205707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACTCTG ACCGGCACAC GCGCGCACCG CTGTTCGAGG CGCTGCGCCG GTTCGTCGAA CGCGATCAGG CGCCGTTCTA CAGTCCCGGC CACAAGGGCG GCCGCACGCT GGACCCGTGG TTCCGCGAAC ACATCGCCGC CGTCGACCTC AACAATCTCG CGGACCTCGA CACGCTGCAC TGCCCCAGCG GGCCGATCCT CGAAGCCGAA GAACTGATCG CCGATGCGTG GGGCGCCAAG GCGAGCTTCA TCCTCGTGCA GGGGTCGACC GGCGGCAACA TCGCGGTCGC GTTGTCGGCG CTGCGACCCG GCGATCCGGT GCTGGTGCAG CGCAACGCCC ACAAGTCGGT GCTGGCCGGT CTGGTCCAGT CCGGTGCGCG GCCGATCTGG CTGACGCCGC AGTGGGATGC GGATTTCGGT GTCGCGCACG GCCTTCCGGT CGACCGCGTC GAGGCGGCTC TGACCGCCGA GACCGCGGCC GCGCTGTGGA TACTGCACCC CACCTACTTC GGGACGACCG CCGACATCGC CGCGCTCACC GCGGTGTGCC GCCGCCACGG CATCCCGCTG CTCGCCGACG GCGCCCACTC CCCGCACTTC GCCTTCCACC CCGACCTGCC GGCCGCCGCC GAGACCGCAG GGGCGGCGGC GACCGTGCAG TCGGTGCACA AGATCCTCTC CGGGCTCAGC CAGGCCGCGG TGCTGCACGT CGACACCGAT CAGCTGGACG TGCCGACGGT GCGCCGCGCG CTGCAGCTGG TCCAGACCAC CAGCCCGCAT TTCGCGATCA TGGCGTCGAT CGATCTGGCC CGCCGCCAGA TGGTGGAGGA CGGCCGCCGC CTCCTCGACG AGACGCTGCG GCGCGCCCGC GACACCGCTG CGCGGCTGGC CCAGATCCCG GGACTACGCG TGCTGAGCGA CCACGACCTC ACCGGTCCGG GGTCCGGACT CCACCAGCGC GACGAGACCA AACTGCTGAT CGGGACGCAC GGACTGGCCG CCGACGCATC CGACATCCTG GCGCGGCTGA CCCGGGAACA CGGCGTGCAG CCCGAACTCG CCGGCGCCGG CCACATCCTG TGCATCACCA CGATCGGCAA CACCGACGCC GACATGGACC GGCTGGTCGA CGGCCTGACC GATGTCGCCC TGGCGGTGGG CCGGCGCGAC GGCGGGTGCC CGCCCGATGT GGGCGGTGCG CTCGACCTGG CCCCGGAGAT CGTGCTGACC CCGCGCGAGG CCTTCTTCGC CGACGTGGAC ACGGTTTCCC TGCGCGCGGC GGTCGGCCGC ATCGCCGCCG AACCGATCAC GCCCTACCCG CCGGGCATTC CGCTGGTGAT GCCCGGCGAA CGCCTCAGCG CCGAGGTCGT CGACGTACTC GACGGCCTGC GCGGTGCGGG CAACCCGATC AGCGCGGCGG ACCCCACCCT CGAGCGGGTG ACCGTCGTCC GGTGA
|
Protein sequence | MDSDRHTRAP LFEALRRFVE RDQAPFYSPG HKGGRTLDPW FREHIAAVDL NNLADLDTLH CPSGPILEAE ELIADAWGAK ASFILVQGST GGNIAVALSA LRPGDPVLVQ RNAHKSVLAG LVQSGARPIW LTPQWDADFG VAHGLPVDRV EAALTAETAA ALWILHPTYF GTTADIAALT AVCRRHGIPL LADGAHSPHF AFHPDLPAAA ETAGAAATVQ SVHKILSGLS QAAVLHVDTD QLDVPTVRRA LQLVQTTSPH FAIMASIDLA RRQMVEDGRR LLDETLRRAR DTAARLAQIP GLRVLSDHDL TGPGSGLHQR DETKLLIGTH GLAADASDIL ARLTREHGVQ PELAGAGHIL CITTIGNTDA DMDRLVDGLT DVALAVGRRD GGCPPDVGGA LDLAPEIVLT PREAFFADVD TVSLRAAVGR IAAEPITPYP PGIPLVMPGE RLSAEVVDVL DGLRGAGNPI SAADPTLERV TVVR
|
| |