Gene Mmcs_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_0179 
Symbol 
ID4109025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp198940 
End bp199683 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content72% 
IMG OID638029304 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_637356 
Protein GI108797159 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.247071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGGGC ACATGACTGA TTCGAAGATC ATCCTCGTCA CCGGCGCCAG CAGCGGGATC 
GGCGCCGCCG TCGCCACCCA CCTCGCCCGC GCCGGCCACC ATGTCATCGC CGGCGCGCGC
CGCGAGGACC GCCTGCGCGA ACTCGCCGAC GGCGCCGCCG ATCTCGAGCG CGGCAGCCTG
TCGGTGCGCC GGCTCGACGT CACCGACCGC GCCGAGATGG CGGCCTTCGT CGACGACGCC
GTGTCCACTC ACGGCCGTCT CGATGTCCTC GTCAACAACG CCGGGATCAT GCCCCTGTCG
CGGCTCGACG CCCTGCTGGT CGACCAGTGG GACGCCATGA TCGACGTCAA CGTCCGGGGC
CTGCTCAACG GCATCGCCGC GGCGCTGCCG CACTTCCACC GGCTCGGCGG CGGACACTTC
GTGACCGTGG CCTCGATCGG CGCCCACGAG GTGGTGCCCA CGTCCGCGGT GTACAGCGCC
ACCAAGTACG CCGCGTGGGC GATCACCGAG GGCCTGCGCC AGGAGTCCGA CCCCTCGATC
CGCGTCACGA CCGTCTCCCC CGGCGTGGTG GAGTCCGAGC TCGCGAGCAC CATCACCGAT
CCCGGCGCCG CGGCGGCGAT GCAGGAGTAC CGGGCCGCCG CGATCACACC GGACGCGATC
GCCCGAGCCA TCGCCTACGC GATCTCCGAA CCCGAGGAGG TCGATGTCAA CGAGGTGATC
GTGCGGCCGG CGCGCCAGCG CTGA
 
Protein sequence
MLGHMTDSKI ILVTGASSGI GAAVATHLAR AGHHVIAGAR REDRLRELAD GAADLERGSL 
SVRRLDVTDR AEMAAFVDDA VSTHGRLDVL VNNAGIMPLS RLDALLVDQW DAMIDVNVRG
LLNGIAAALP HFHRLGGGHF VTVASIGAHE VVPTSAVYSA TKYAAWAITE GLRQESDPSI
RVTTVSPGVV ESELASTITD PGAAAAMQEY RAAAITPDAI ARAIAYAISE PEEVDVNEVI
VRPARQR