Gene Mmcs_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_0168 
Symbol 
ID4109014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp182850 
End bp183986 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content70% 
IMG OID638029293 
Producthypothetical protein 
Protein accessionYP_637345 
Protein GI108797148 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCCACG ACGCGACGGC GAACGACGCC AAGCGAGGAC GGGCCGACCC CGACGGATCC 
ACCCGCGGTA AGTACTGGTG GGTCCGCTGG GCGATCATCA CCGTCGCGGT CGTCGTGCTC
ACCGTCGAAG TGGTCCTGGT GTGGGATCAG CTGGCGAAGG CCTGGAAGAG CCTCGTCTCC
GCGAACTGGT GGTGGGTGGT CGCCGCCGTC GTCGCGTCCC TGGCCTCGAT GCACAGCTTC
GCGCAGATCC AGCGCACGCT TCTGCGCTCG GCCGGGGTGC ACCTGAAGCA GTGGCGCTCG
GAGGCGGCGT ATTACGCGGG CAACGCGCTG AGCACCACGA TGCCCGGTGG CCCGGTGCTC
TCGGCGACGT TCCTCTACCG GCAGCAGCGG CTGTGGGGCG CGAGCCCGGT GGTGGCGTCA
TGGCAGCTGG TGATGTCCGG TGTGCTGCAG GGCGTCGGCC TGGCGTTGCT CGGCCTCGGC
GGTGCGTTCA TGCTCGGCGC GAGCAAGAAC CCGCTGTCGT TGATCTTCAC GCTGGGCGGC
TTCGCCGCGC TGCTGGTGCT CGCGCAGGCA GTCGCGAGCC GGCCCGAGTT GATCGACGGT
ATCGGCGCAC GGCTGCTGGC CCGGTTCAAC TCGCTGCGCA ACAAACCCCT CGACACGGGT
CTGGCGAAGT GGCGGGAACT GCTGCGGCAA CTGGAGTCGG TGCAGCTGGG CCGACGCGAC
CTCAGCATGG CGTTCGGGTG GTCGCTGTTC AACTGGATCG CCGACGTCGC CTGCCTGGCG
TTCGCCTGTT ACGCCGCGGG CGGTCACCCG TCGCTGGCCG GGCTCACCGT CGCCTACGCC
GCCGCGCGTG CGGTCGGCAC CATCCCCCTC ATGCCGGGTG GGCTGCTGGT CGTGGAGGCG
GTGCTGGTCC CGGGTCTGGT GTCGAGCGGG ATGACGCTGG CCGGCGCGAT CTCCGCGATG
CTCATCTACC GGCTCGTCAG CTGGATCTTC CTGGCCGCCA TCGGCTGGGT GGTGTTCTTC
TTCGTGTTCC GCACCGAGAA GGACATCGAC CCCGACGCGC CCGTGAAGGG TGCGCACAAG
GCCGGCGAGC CGATCCGCAA CCAGCCGCCC CGTTCCGCGC GCGAGGATCT GGGTTGA
 
Protein sequence
MSHDATANDA KRGRADPDGS TRGKYWWVRW AIITVAVVVL TVEVVLVWDQ LAKAWKSLVS 
ANWWWVVAAV VASLASMHSF AQIQRTLLRS AGVHLKQWRS EAAYYAGNAL STTMPGGPVL
SATFLYRQQR LWGASPVVAS WQLVMSGVLQ GVGLALLGLG GAFMLGASKN PLSLIFTLGG
FAALLVLAQA VASRPELIDG IGARLLARFN SLRNKPLDTG LAKWRELLRQ LESVQLGRRD
LSMAFGWSLF NWIADVACLA FACYAAGGHP SLAGLTVAYA AARAVGTIPL MPGGLLVVEA
VLVPGLVSSG MTLAGAISAM LIYRLVSWIF LAAIGWVVFF FVFRTEKDID PDAPVKGAHK
AGEPIRNQPP RSAREDLG