Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_0123 |
Symbol | |
ID | 4108969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 139129 |
End bp | 140688 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638029248 |
Product | virulence factor MCE-like protein |
Protein accession | YP_637300 |
Protein GI | 108797103 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGACTC GCTTCATCAA GATCCAGCTG ATCATCTTCA CCGTGCTGAC GGTGATCGCA CTCGTGGCGC TGGGCTGGTA CTACCTGCGG GTGCCGAGCC TGATGGGAAT CGGGCAGTAC AAGCTGTACG CCGAACTGCC TAGGTCGGGT GGTCTGTACG AGACCGCCAA CGTGACCTAC CGCGGCACGA CGATCGGCAA GGTCACCGCG GTCGAGCCCA CCGAGCGCGG CGCCAAGGCG ACCATGAGCA TCGACAACCG GTACAGGATC CCGGTCGATG CGAGCGCCAA CGTGCACTCG GTCTCGGCCA TCGGTGAGCA GTACCTCGAC CTGGTGTCGA CCGGCAACCC GGGCCAGTAC TTCAGCGACG GGCAGACCAT CACCAAGAGC ACGGTGCCCA GCGAGGTGGG ACCCGCACTC GATGCGGCCA ACGAGGGCCT TGCCGTGCTG CCCAGGGAGA AGATCGACGC GCTGCTCACC GAGACCGCGG ACGCGGTCGG CGGCCTCGGC CCGTCGTTGC AGCGGCTGGT GGACTCCACC ACGTTGATCG CCCAGGACTT CAAGGACAAC CTGGGGCCGG TCAACGACAT CATCGCGAAC TCGGCGCCGA TCCTCGAGAG CCAGGTCAAC TCGGGCGACA ACATCGCGCA GTGGTCGCGC AACCTCAACA TCCTGGCGGC CCAGTCGGCC GAACAGGACG CCGCGCTGCG CAGCGGTCTG CAGCAGGCCG CGCCGACCGC CGATCAGCTC AACGCGGTGT TCAGCGGGGT GCGTGACTCG TTGCCGCAGA CGCTGGCCAA CCTGGCGGTC GTCATCGACA TGCTGAAGCG CTACAACAAG GGTCTGGAAC AGGCGCTGGT GGTGCTGCCC CAGGGTGCGT CGGTCGCGCA GGCGGGCACG ATCTTCGAAG GTGAGGGTCT GCTGCACTTC GGTCTGTCGA TCAACCAGCC GCCACCGTGT TTGACCGGGT TCCTGCCGGC ATCGGAATGG CGGGCGCCGG CCGACACCAG CATGAAAGAG CTGCCGTCGG GCACCTACTG CAAGATTCCG AAGGACTTCC AGGCCAACGT CGTCCGCGGT GCGCGTAACT ATCCGTGTGC CGATGTGCCG GGTAAGCGCG CGGCGACACC GAAGGAGTGC CGCAGCGACG ATCCCTACGT GCCGCTGGGC ACCAACCCCT GGTACGGCGA CCCGAACCAG ATCCGGGACT GCCCGGCCGC CGGTGCGCGA TGCAACCAGC CCGTGCACCC GGGTCGCAAC GGCGTGATCC CCGCGCCGTC GATCAACAAC GGGATGAACC CGCTGCCCGC CGATCAGCTG CCCCAGCCGC CGTCGCCGGT CAGCGACCCG TTGAGCCCGC CGGGGCAGGG CCGTGTCGAG TGCAGTGGAC AGCAGCCCAA CCCGTGCATC TACACTCCGG CACCAGGACC ACCGGGCACC GCTGTGTACA ACCCAGCCAG CGGCGAGGTG GTCGGACCTG ACGGCGTCAA GTACAACGTC AGCAATTCGA GCAACCCAGG AGACGACGGA TGGAAGGAGA TGCTGGCACC CGCCAGCTGA
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Protein sequence | MLTRFIKIQL IIFTVLTVIA LVALGWYYLR VPSLMGIGQY KLYAELPRSG GLYETANVTY RGTTIGKVTA VEPTERGAKA TMSIDNRYRI PVDASANVHS VSAIGEQYLD LVSTGNPGQY FSDGQTITKS TVPSEVGPAL DAANEGLAVL PREKIDALLT ETADAVGGLG PSLQRLVDST TLIAQDFKDN LGPVNDIIAN SAPILESQVN SGDNIAQWSR NLNILAAQSA EQDAALRSGL QQAAPTADQL NAVFSGVRDS LPQTLANLAV VIDMLKRYNK GLEQALVVLP QGASVAQAGT IFEGEGLLHF GLSINQPPPC LTGFLPASEW RAPADTSMKE LPSGTYCKIP KDFQANVVRG ARNYPCADVP GKRAATPKEC RSDDPYVPLG TNPWYGDPNQ IRDCPAAGAR CNQPVHPGRN GVIPAPSINN GMNPLPADQL PQPPSPVSDP LSPPGQGRVE CSGQQPNPCI YTPAPGPPGT AVYNPASGEV VGPDGVKYNV SNSSNPGDDG WKEMLAPAS
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