| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_0120 |
|---|
| Symbol | |
|---|
| ID | 4108966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 134730 |
|---|
| End bp | 136316 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638029245 |
|---|
| Product | virulence factor MCE-like protein |
|---|
| Protein accession | YP_637297 |
|---|
| Protein GI | 108797100 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.265453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACGC TCGAGGGATC GAACCGCCTC CGCGGCGGGT TGATGGGCAT CATCATCCTG
GTGCTCGTCG TCGGGGTCGG ACAGAGCTTC GCCAGCGTGC CTATGCTGTT CGCCAAGCCG
AGGTACTTCG CGCAGTTCGG CGACACCGGC GGCATCAACC CCGGCGACAA GGTCCGCATC
GCCGGCGTCG ACGTCGGCGA GGTGCTCAAG ACCGAGATCG AGGGCGACAA GGTCGTCGTC
GGCTTCACGC TGGGCGGTAC GCAGATCGGC AGTGACAGCC GCGCGGCGAT TCGCACGGAT
ACGATTCTGG GCCGAAAGAA CATCGAGATC GAACCGCGCG GGTCGGAGGC GCTGCAGTCC
AACGGCGTCC TGCCGCTGGG TCAGACGACC ACCCCGTACC AGATCTACGA CGCCTTCTTC
GACCTCACCA AATCGGCGTC CGGCTGGGAC ACCAAGTCGG TGCGCGAATC GCTCAACGTG
CTGTCGGAGA CGATCGACCA GACCTATCCG CACCTGAGCG CGGCGCTCGA CGGGGTGGCC
CGCTTCTCCG ACACCATCGG TAAGCGCGAC GAGCAGCTCA AACAGCTGCT GGCCAATGCC
AACAAGATCG CCGGGGTGCT GGGTGAGCGC AGCGGTCAGG TGAATGCGCT GCTGGTCAAC
GCGCAGACCC TGCTGGCCGC GATCAACGAG CGCAGCTACG CCGTCGGCCA GCTGCTGGAG
CGGGTGTCGG CGTTCTCGGA GCAGGTCGAG GGCTTCATCG ACGACAACCC GAACCTCAAC
AGGGTGCTCG AGCAGCTGCG CGTGATCAGC GACATCCTCG TCGAGCGCAA ATTCGACCTG
GTCGACGTGC TGACCACGCT GAGCAAGTTC ACCGCATCGC TGGCCGAGGC CTTCGCGTCC
GGCCCGTACT TCAAGGTCAT GCTGGTCAAC CTGGCGCCCT ACTGGATCCT GCAGCCGTAC
GTCGACGCGG CGTTCAAGAA GCGCGGCATC GACCCGCAGA AGTTCTGGCG TGACGCCGGT
CTGCCGGCCT ACCAGTTCCC GGATCCGAAC GGGGTGCGTC AGCCCAACGG TGCGCCGCCG
CCTGCGCCGG CGACCCTGCA GGGCACTCCG GAGTACCCGA ATCCCGCGGT GCCGAGGGGC
GACCCATGTT CCTACACCCC GCCGGCCGAC GGCCTGCCCA CACCGGGCAA TCCGCTGCCG
TGTGCGGACC TGAGCGTCGG CCCGTTCGGC GACAATCCCT ACGGTCCGAA CTACCACGGC
CGGCCCAACG TGGCGACGTC GGAGCCGAAC CCGAACGGCA TGTTGCCCAC TCCCGGCGTC
GCCAGTTCCG GGGTGCCGGG TCAGCAGGCG CCCGTGGTGC CGGGTACGCC CGTGCCGCTG
CCGCCGGCCC CGCCGGGTGC GCGCAACGAG CCGCCGGGAC CGTTCCCCGG TCCGACGGCC
GTAGGCGGTC AGGTGAACAA CGTGCCGCCG CCGCCGGCGC TGCCGGGTCC GCCGCCGCCG
CCGGGGCCGG GCCAGCAGCT GTCGCCCGCC CAGACGGGTC CGCTGCCGGG CAATCCACCG
TTCCTCCCGC CGGGATCTCA ACAATGA
|
|---|
| Protein sequence | MRTLEGSNRL RGGLMGIIIL VLVVGVGQSF ASVPMLFAKP RYFAQFGDTG GINPGDKVRI
AGVDVGEVLK TEIEGDKVVV GFTLGGTQIG SDSRAAIRTD TILGRKNIEI EPRGSEALQS
NGVLPLGQTT TPYQIYDAFF DLTKSASGWD TKSVRESLNV LSETIDQTYP HLSAALDGVA
RFSDTIGKRD EQLKQLLANA NKIAGVLGER SGQVNALLVN AQTLLAAINE RSYAVGQLLE
RVSAFSEQVE GFIDDNPNLN RVLEQLRVIS DILVERKFDL VDVLTTLSKF TASLAEAFAS
GPYFKVMLVN LAPYWILQPY VDAAFKKRGI DPQKFWRDAG LPAYQFPDPN GVRQPNGAPP
PAPATLQGTP EYPNPAVPRG DPCSYTPPAD GLPTPGNPLP CADLSVGPFG DNPYGPNYHG
RPNVATSEPN PNGMLPTPGV ASSGVPGQQA PVVPGTPVPL PPAPPGARNE PPGPFPGPTA
VGGQVNNVPP PPALPGPPPP PGPGQQLSPA QTGPLPGNPP FLPPGSQQ
|
|---|
| |