| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_0119 |
|---|
| Symbol | |
|---|
| ID | 4108965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 133702 |
|---|
| End bp | 134733 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638029244 |
|---|
| Product | virulence factor MCE-like protein |
|---|
| Protein accession | YP_637296 |
|---|
| Protein GI | 108797099 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.410781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCA CCGGTACCGC ACTCAAACTC GGCGCCTTCT CGCTGGTGCT GCTGCTGTTC
ACCGCGATCA TCATCGTGGT GTTCGGTCAG ATGCGTTTCG ATCGCACCAC CGGCTACTCG
GCGATCTTCA CCAATGTCAG CGGCCTGCGG CCCGGCCAGT TCGTCCGCGC CTCCGGCGTC
GAGGTCGGCA AGGTCTCCAA GATCGAGCTG ATCGAAGGGG GCAGCCGGGT CAAGGTCGAC
TTCAAGGTCG ACCGGTCCCT GCCCCTGTTC GACGAGTCCA CCGCGTCGGT GCGCTACCTG
AACCTGATCG GCGACCGCTA CCTCGAACTC AAGCGCGGCG ACAGCGATCG GAAGATGCCC
TCCGGCGGCA CCATCCCGGT CGAGCGCACC GAACCCGCGC TGGACCTCGA CGCGCTCATC
GGCGGTTTCC GCCCGCTGTT CCGGGCGCTC GACCCGGAGA AGGTCAACAA CATCGCCAGG
TCGATCATCA CGGTATTCCA GGGGCAGGGC GGCACCATCA ACGACATCCT CGACCAGACC
GCGTCGCTGA CGTCGGCGCT GGCCGATCGA GACCAGGCGA TCGGTGAGGT GATCCGCAAC
CTCAACACCG TGCTCGACAC CACCGTCAGG CACCAGGAGC AGTTCGACGA AACGCTGGTG
AACTTCGAGC GGCTCATCAC CGGTTTGAAG AACCGCGCCG ACCCGATCGC GTCGTCGGTC
GCCGACATCA GCGACGCCGC GGGCACCGTG GCCGACCTGC TCGCCGAGAA CCGGTCGCTG
CTGCAGGACA CGGTCGGCTA CCTGGAGGCC ACCCAGCAGC CGCTGGTCGA GCAGAAGGGT
CAGCTCAATG ACATCCTCGT CCGGTTGCCG AACGCGTTGA AGATCATCGG CCGCGCCGGC
GGCGTGTACG GCGACTTCTT CAACTTCTAC GCCTGCGACG TGACGCTCAA GCTCAATGGC
CTGCAGCCGG GCGGGCCGGT GCGCACCGTC AAGGTGTGGG GTCAGCCCAC GGGTAGGTGC
ACTCCGCAAT GA
|
|---|
| Protein sequence | MKITGTALKL GAFSLVLLLF TAIIIVVFGQ MRFDRTTGYS AIFTNVSGLR PGQFVRASGV
EVGKVSKIEL IEGGSRVKVD FKVDRSLPLF DESTASVRYL NLIGDRYLEL KRGDSDRKMP
SGGTIPVERT EPALDLDALI GGFRPLFRAL DPEKVNNIAR SIITVFQGQG GTINDILDQT
ASLTSALADR DQAIGEVIRN LNTVLDTTVR HQEQFDETLV NFERLITGLK NRADPIASSV
ADISDAAGTV ADLLAENRSL LQDTVGYLEA TQQPLVEQKG QLNDILVRLP NALKIIGRAG
GVYGDFFNFY ACDVTLKLNG LQPGGPVRTV KVWGQPTGRC TPQ
|
|---|
| |