Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_0118 |
Symbol | |
ID | 4108964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 132485 |
End bp | 133705 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638029243 |
Product | virulence factor MCE-like protein |
Protein accession | YP_637295 |
Protein GI | 108797098 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.440503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAGC CGCGTTCCCC CGTCAACAAG CCCCGCACGC CGCCCTACAA GCTGGCCGGC CTGATCCTGC TGGTGGTCTT CGCCGTCATC GCCACGCTGG TCGCGTTCCA GTTCCGCGGT GACTTCACCC CGCGTGAGAA GCTGACCATG ATGGCGGCCC GCGCCGGTCT GAACCTCGAC CCCGGCACCA AGGTGACCTT CAACGGTGTG GAGATCGGCC GCGTCGCCGA GGTCAACGCG GTCAGCGTCG GCAACGATCC CCGGGCCAGG ATCACGCTCG AGGTCGACAC GAAGTACATG CAGCTGATCC CGGCGAACGT GCTTGCGGAC ATCTCGGCGA CCACGGTGTT CGGCAACAAG TACGTCTCGT TCACCACGCC GCCCGACCCG GTCCCGCAGC GGATCAAGTC CACCGACGTC ATCGACGTGA CCAGCGTGAC GACGGAGTTC AACACGCTGT TCGAGACCGT CGTGTCGGTG GCGGAGAAGG TGGACCCGGT CAAGCTGAAC CAGACCCTGA CCGCGACCGC ACAGGCCCTG GACGGCCTCG GCGACCGCTT CGGCGAGTCG ATCGTCAACG GCAACGCGAT CCTGGCCGAC CTCAACCCGC AGATGCCGCA GATCCGACGG GACGTCCGCG GGCTGGCCGA CCTCGGCGAG GTGTACGCCA ACGCCGCCCC CGATCTGTTC GACGGGCTGG AGAATGCGGT GACCACGGCC CGCACGCTCA ACGAACAGCG CGGCAACCTC GATCAGGCGC TCATCGCGGC GGTCGGCTTC GGCAACACCG GCGGTGAGGT GTTCGAACGT GGTGGTCCCT ACCTGGTCCG CGGTGCGGAG GACCTCATCC CGACGAGTGC GCTGCTCGAC GAGTACAGCC CCGCGCTGTT CTGCACGATC CGCAACTTCC ACGACGTGGA GCCGAAGATC TCGTCGTCGC TGGGCGGGAA CGGCTATTCG CTCAACACCC ACTCCGAGGC CCTCGGCGCG GGCAACCCGT ACGTGTACCC GGACAACCTG CCGCGCGTGA ACGCCAAGGG TGGTCCGGAG GGGCGGCCCG GCTGCTGGCA GCCCATCACC CGGGATCTGT GGCCCGCGCC GTACCTGGTC CTCGACACAG GCGCCTCCCT TGCGCCGTAC AACCATCTCG AACTCGGTCA ACCGATCGCC ATCGAATACG TCTGGGGACG CCAGATCGGG GAGAACACGA TCAACCCATG A
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Protein sequence | MAEPRSPVNK PRTPPYKLAG LILLVVFAVI ATLVAFQFRG DFTPREKLTM MAARAGLNLD PGTKVTFNGV EIGRVAEVNA VSVGNDPRAR ITLEVDTKYM QLIPANVLAD ISATTVFGNK YVSFTTPPDP VPQRIKSTDV IDVTSVTTEF NTLFETVVSV AEKVDPVKLN QTLTATAQAL DGLGDRFGES IVNGNAILAD LNPQMPQIRR DVRGLADLGE VYANAAPDLF DGLENAVTTA RTLNEQRGNL DQALIAAVGF GNTGGEVFER GGPYLVRGAE DLIPTSALLD EYSPALFCTI RNFHDVEPKI SSSLGGNGYS LNTHSEALGA GNPYVYPDNL PRVNAKGGPE GRPGCWQPIT RDLWPAPYLV LDTGASLAPY NHLELGQPIA IEYVWGRQIG ENTINP
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