Gene Mmcs_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_0116 
Symbol 
ID4108886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp130793 
End bp131590 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content69% 
IMG OID638029241 
Producthypothetical protein 
Protein accessionYP_637293 
Protein GI108797096 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.239683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCCT CCAGTGGCGG GTTGACGGGA TACGTACGTG ATCAGGTCAG GCCGGGGCTC 
GAAGCCGTCG GCGGGTTCGT CCGGATGTGC GTGCTGACCG GTAAGGCGCT GTTCCGTCCG
TTCCAGTGGC GCGAGTTCAT CCTGCAGGCC TGGTTCCTGT TCCGGGTGTC CTTCCTGCCC
ACCGTCGCAG TCTCCGTGCC GCTGACGGTC CTCATCATCT TCACGCTCAA CATCCTGCTC
GCCGAATTCG GCGCCGCCGA CGTCTCCGGC GCCGGTGCGG CGCTCGGCGC CGTCACCCAG
CTCGGACCGC TGGTCACCGT GCTCGTGGTC GCCGGCGCCG GATCGACCGC CATCTGCGCC
GACCTCGGCG CCCGCACCAT CCGCGAGGAG ATCGACGCCC TCGAGGTGCT CGGCATCGAC
CCGATCCACC GTCTGGTGGT TCCGCGTGTC GTCGCCTCCA CCTTCGTCGC GCTCCTGCTC
AACGGCGCGG TCATCACCAT CGGCCTGGTC GGCGGCTTCA TCTTCGGCGT CTACATCCAG
AACGTTTCGG CGGGCGCCTA CGTCTCCACG CTCACGCTGG TGACCGGCCT GCCCGAGGTG
CTCATCTCCG TCGTCAAGGC CACCACGTTC GGCCTCATCG CCGGGCTGGT CGGCTGCTAC
CGGGGGCTCA CCGTGGGCGG CGGCGCCAAG GGCGTCGGCA CCGGCGTGAA CGAGACCCTG
GTGCTCTGCG TCGTCGCGCT GTTCGCGGTC AACGTGGTGC TCACGACCAT CGGCGTGCGG
TTCGGAACGG GGCGCTGA
 
Protein sequence
MTASSGGLTG YVRDQVRPGL EAVGGFVRMC VLTGKALFRP FQWREFILQA WFLFRVSFLP 
TVAVSVPLTV LIIFTLNILL AEFGAADVSG AGAALGAVTQ LGPLVTVLVV AGAGSTAICA
DLGARTIREE IDALEVLGID PIHRLVVPRV VASTFVALLL NGAVITIGLV GGFIFGVYIQ
NVSAGAYVST LTLVTGLPEV LISVVKATTF GLIAGLVGCY RGLTVGGGAK GVGTGVNETL
VLCVVALFAV NVVLTTIGVR FGTGR