Gene Mmcs_0108 details

Gene Information

• Locus tag: Mmcs_0108
• ID: 4108879
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: +
• Start bp: 122821
• End bp: 123480
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 638029234
• Product: TetR family transcriptional regulator
• Protein accession: YP_637286
• Protein GI: 108797089
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.244027
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGCCG AAGCCTCGCC GAACGGCTCG ACGCGGCGCG ATGAGCTGCT GAGGGTCGCC 
ACCAAGCTGT TCGCCGCCCG CGGCTACCAC GGCACCCGGA TGGATGACGT CGCCGACGCC 
GTCGGCCTGA ACAAGGCCAC GGTGTACCAC TACTACGCGA GCAAGTCGCT CATCCTCTAC 
GACATCTACA AAGGCGCCGC CGACTTCACC GTCGACGCAC TGCACGACGA TCCGACGGCG 
TCGGCCCGCG AGACGATCTA CCACTTCACC CGCCGGTTGC TCGTCGGCAT CGCCAACGAC 
ATCGAGCGCG CCGCCGTGTA CTTCCAGGAG GGCCCCTACA TCGGCGAGTG GTTCACCGAG 
GAGCAGGTCG AGTACATCCG CGAGAAGGAG ACCCAGGTCT ACGAGCACGT GCGTGACGTG 
ATCGACCGGG GCATCGCCAG CGGCGAGTTC TACGACTGCG ATTCGCACGT GCTGGCGCTC 
GGCTACATCG GGATGACGCT GGGCGCCTAC CGCTGGCTGC GGCCCCAGGG CCGGCGCACC 
GCACAGGAGA TCGCCGAGGA GTTCAGCACC GCACTGCTGC GCGGGCTGAT CCGCGACGAG 
GCGGTGCGCA CCGAGTCACC GCTGGGCGTG GACGTCCGGA CGGGAGTAGG CAGTGACTGA 

 

Protein sequence

MSAEASPNGS TRRDELLRVA TKLFAARGYH GTRMDDVADA VGLNKATVYH YYASKSLILY 
DIYKGAADFT VDALHDDPTA SARETIYHFT RRLLVGIAND IERAAVYFQE GPYIGEWFTE 
EQVEYIREKE TQVYEHVRDV IDRGIASGEF YDCDSHVLAL GYIGMTLGAY RWLRPQGRRT 
AQEIAEEFST ALLRGLIRDE AVRTESPLGV DVRTGVGSD