| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_0103 |
|---|
| Symbol | |
|---|
| ID | 4108874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 118065 |
|---|
| End bp | 119672 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638029229 |
|---|
| Product | Na+/H+ antiporter |
|---|
| Protein accession | YP_637281 |
|---|
| Protein GI | 108797084 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
|---|
| TIGRFAM ID | [TIGR00831] Na+/H+ antiporter, bacterial form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.861179 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACACGT CTGACCCCAC CTCTGACCGA TGGAAGGATC ACCCCGCCTT GGCCGCTCTC
ACCCTGTGCC TGGCTCTGTT GGCGGCCACC GTCGTCCTCG CCCCCGCGGC GCAACGCCTC
TCCGTGCCGT ATCCGGCGGT GATGCTGGCG TTCGGGCTGG CGCTGGCGTT CATCCCGGGC
GTCCCGGTGC TGTCGCCGAA TCCCGAATTG ATCCTTCCGC TCGTCCTGCC GCCGCTGCTG
TTCGCCGCCG CCCGCCGCAC CTCCTGGCGG GAGTTCCTCG ACAATCGCCG CCCCATCGCG
CTGCTGGCCG TCGCGCTGGT CGGCGTCACC GCCGTCGCGG TCGGCGCGAC GCTGCACGCC
CTGGTGCCGA CCGTCCCGCT GATCGCGGCG ATCGCCCTCG GCGCGGCCGT CGCCCCACCG
GACGCCGTGG CCGCCACCGC GGTCGCCCAG AAGCTCGGCA TCCCGCGACG GCTGCGCACG
ATCCTCGAGG GGGAGGGGCT GTCCAACGAC GCCACCTCGC TGGTGCTCTA CGAGGTGGCC
GTCGCCGGCA CGATGACCGG CGCGTTCTCC GCCTGGGGCG CGGGTGAGGC ACTCGGGCTC
GCCGTCGTGC TCGGTGTCCT CGTTGGTCTT GCCATCGCCG TCGCCACCCG CTGGCTGATC
AACAAGCTGC CAGCGCACCC GGCGGGCAGC GGTCTGGTCC TGGTCGTGCC GTTCGCGGCC
TACGCCGCCG CGGACGCCGT CCACGGCAGC GGCGTGCTCG CGGTGGTCAC GGTGGCCCTC
GCGATGAGTC GCTACGGCGA CACCCAGTCG TCGCAGACCC GACTGGCCAC CGGGACGACA
TGGGAGATCG TCGAACTGCT GTTGACCGGT TCGGCATTCG CGTTCGTGGG GCTGCAGATG
CGGGCAGTCG CCGACAGCAT CGACATGACC TTCTGGGAAC TGCTCCAACA GGGGCTGATC
ATCACGCTGG TGGTGATCGT CGTGCGGTTC CTGTGGATCT TCCCGGTCGC CACCATCGAC
GAACGGATGC ACCGGCGCAA AGCGCACGTG GCCGAGCCGA TCGGCTGGCG GGAGATGACC
GTCTCGTCAT GGGCGGGGAT GCGGGGTGTC GTGACACTGG CCGCCGTCCT CGCGCTGCCA
CCCCAGTTCC CCGAGCGTGA ACGGCTGGTG TTCTACGCGT TCGTCGTCAT CGTCGTCACC
CTGCTGCTGC AGGGCCTCTC GTTGCCGACC GTGGTGCGGC GGCTCGGCGT GCGCGCCTCT
CCCCACGAAG AGGACGACGC CGTGCAGGCG CTGATCCGGC GGGCCCGCGA CGCCGGCTTC
GAACGCCTCG ACGAAATCCG CGCGCGCGAG GAAGCCGACC CCGAGGTCAT CGAACACGCC
CGCGACAACG CCGAGCGGAT GTGGCAGTCG GTCGGGTTCG CCCCGCCCGA CGCCGAATCC
CACCACGCGC ACACCGACCA CGCGATGACG CTCAACGCGC TCAAGGACGA GATACTCGCG
GCCGCCCGCG AAGCCGTCGT CAAGGCGCGC TCGGAATCGG GCACGGATCC GACGGTCGTC
GACCGGGTGT TGCGCCGCCT CGATACCCGC GGCAGCCAGC CCGAATAA
|
|---|
| Protein sequence | MDTSDPTSDR WKDHPALAAL TLCLALLAAT VVLAPAAQRL SVPYPAVMLA FGLALAFIPG
VPVLSPNPEL ILPLVLPPLL FAAARRTSWR EFLDNRRPIA LLAVALVGVT AVAVGATLHA
LVPTVPLIAA IALGAAVAPP DAVAATAVAQ KLGIPRRLRT ILEGEGLSND ATSLVLYEVA
VAGTMTGAFS AWGAGEALGL AVVLGVLVGL AIAVATRWLI NKLPAHPAGS GLVLVVPFAA
YAAADAVHGS GVLAVVTVAL AMSRYGDTQS SQTRLATGTT WEIVELLLTG SAFAFVGLQM
RAVADSIDMT FWELLQQGLI ITLVVIVVRF LWIFPVATID ERMHRRKAHV AEPIGWREMT
VSSWAGMRGV VTLAAVLALP PQFPERERLV FYAFVVIVVT LLLQGLSLPT VVRRLGVRAS
PHEEDDAVQA LIRRARDAGF ERLDEIRARE EADPEVIEHA RDNAERMWQS VGFAPPDAES
HHAHTDHAMT LNALKDEILA AAREAVVKAR SESGTDPTVV DRVLRRLDTR GSQPE
|
|---|
| |