| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_0093 |
|---|
| Symbol | |
|---|
| ID | 4108864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 108026 |
|---|
| End bp | 108637 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638029219 |
|---|
| Product | haloacid dehalogenase, type II |
|---|
| Protein accession | YP_637271 |
|---|
| Protein GI | 108797074 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTGGCGT TCGACGTCTT CGGGACCGTC GTGGACTGGC GGTCCAGTGT CATCGCCCAA
CTCGAGGAGT TCGGGCGTGC GCACGGGGTG GACGCCGACT GGGCGGCGTT CGCCGACGCC
TGGCGGGCCG GCTATGTGCC GTCGATGGAC CGGGTGCGCC GCGGTGAGCT GCCGTGGACC
CGACTCGACG ACCTGCACCG GATGACGCTC GTCGATCTGC TTGCCGCCGA GCACATCTCG
GTCGGGGACG AGGCCGTCGA CGAGCTCACC CGGGCCTGGC ACCGGCTGGA CCCGTGGCCC
GACAGCGTCG CGGGACTGAC GCGGCTCAAA CGCCGCTACG TCATCACCCC GCTGTCCAAC
GGCAACGTGT CACTGCTGAC GAACATGGCC AAGCGGGCCG GGCTGCCATG GGACTGTGTC
CTGTCGGCCG AGCTGTTCCG GCACTACAAA CCCGACCCCG AGGCCTATCT CGGCTGCGCC
GACCTGCTCG ACGTCACCCC CGATGAGCTG ATGCTCGTCG CCGCGCACCG ATCCGATCTG
CGCGCCGCAC GCGAGGCGGG TCTGCGCACC GCATACGTGT CCCGGCCACT GGAATACGGC
CCCGGACGGT AG
|
|---|
| Protein sequence | MLAFDVFGTV VDWRSSVIAQ LEEFGRAHGV DADWAAFADA WRAGYVPSMD RVRRGELPWT
RLDDLHRMTL VDLLAAEHIS VGDEAVDELT RAWHRLDPWP DSVAGLTRLK RRYVITPLSN
GNVSLLTNMA KRAGLPWDCV LSAELFRHYK PDPEAYLGCA DLLDVTPDEL MLVAAHRSDL
RAAREAGLRT AYVSRPLEYG PGR
|
|---|
| |