| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_0069 |
|---|
| Symbol | |
|---|
| ID | 4108955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 82008 |
|---|
| End bp | 83339 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638029195 |
|---|
| Product | PPE protein |
|---|
| Protein accession | YP_637247 |
|---|
| Protein GI | 108797050 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG5651] PPE-repeat proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.439016 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGA CGGGCATACC CCTTCCACCG ACCTGGACGG CGCTGCCGCC CGAGGTCAAC
ACCGGCCGGC TGATGGCCGG AGCCGGTCCC GCGCCGATGC TGCAGGCCGC GGCCGGGTGG
GAGGCGCTCG CCGTGCTGTT GGAGACCCAG GCCGACGAAC TCGCCGCGAG CCTGGCGAAC
CTGTCGTCGA TGTGGACGGG CACCGCGAGT GAACGGGCCG TGGCCGCGAC CATGCCGATG
GTCCTCTGGT TGCGGACCAC GTCGGCGCAG GCCATGAAGC GGGCGCTGCA GGCGGCCAAC
CAGGCAAACT CCTACACCCT TGCAATGGCA ACTACTCCGC CGTTGCCGGA GATCGAACAG
AACCACATCA CGCACGCGGT CCTCGAGGCG ACGAACTTCC TGGGCGTCAA CACCGTGCCG
ATCGGGGTGA ACGAGTTCGA CTACTTCGTC CGGATGTGGA ACCAGGCCGC CGGGGCGATG
GACGTGTACC AGGCCGAGAC CCAGATGAAC CTTCTGTTCG AACCGATTCC GCCGATGACG
CCGATCGTCA TCCCCGGCGT CGGCGAGAGC ACCGGCGCCG CCGCGGTGGC CCAGGCGGGC
GCCCGCGCCC CGATGGGGGT GGCCCGCAAC GGGCTCATCG CCAAGGCCAG CGCCACCGCC
AAGATGGAGT CCGTCGGCCT CAACGCCGGC CGGGCGATGG CCCAGGGCAA CATGGCCGCG
CAACGCGCGC AGGGTGCGGT GCAGAAGGGG GAGCAGGCCG CACACCAGCA GCCGCAGGAC
CAGGTTATGC AGCAGGGCGT CCAGATGGGT GTGCAGATGG CCGGCCAGGT GGGTTCCATG
GTCGCGCAGG TACCGCAGCA GTTCGGCCAG ATGGTGCAGA CCCCGATGCA GATGCTGACC
CAACCGCTGC AGCAGGTGTC GTCGATCTTC GGTCAGATGG GCGGCGGTCT CGGCGGCGAG
AAGGCCCAGA TCGGCGTCAT CGGTGCCGCA CCGTTCTCCA ACCATCCGCT CGCGGGTGGT
TCCGGTGTGA GCTCGGGTGC GGGTCTGGTC CGGGCGGCGT CGCTGCCCGG CGCCGGGGGG
ACCGCGGCGC GCACACCGCT GATGGCCAAC CTCGTCGGCG ACAAGATGGC GGCCGCACCC
GTGCCCGTCG GGGCCGGCGC GGCGGCCGGA GCCACCGTCG GCGGTCTGGC GCCTGTCGGC
GGCGCGGGCG GTGGGATGGG CCCGATGGGG ATGGCCGGAC AGGGCGCCAA GGGCGGCGGT
TCGAAGCCGG GGCTGACCGC ACCCGCACCA CTCGTCCACG ACCTGGACGA GGACGACGGC
GACGACTGGT GA
|
|---|
| Protein sequence | MALTGIPLPP TWTALPPEVN TGRLMAGAGP APMLQAAAGW EALAVLLETQ ADELAASLAN
LSSMWTGTAS ERAVAATMPM VLWLRTTSAQ AMKRALQAAN QANSYTLAMA TTPPLPEIEQ
NHITHAVLEA TNFLGVNTVP IGVNEFDYFV RMWNQAAGAM DVYQAETQMN LLFEPIPPMT
PIVIPGVGES TGAAAVAQAG ARAPMGVARN GLIAKASATA KMESVGLNAG RAMAQGNMAA
QRAQGAVQKG EQAAHQQPQD QVMQQGVQMG VQMAGQVGSM VAQVPQQFGQ MVQTPMQMLT
QPLQQVSSIF GQMGGGLGGE KAQIGVIGAA PFSNHPLAGG SGVSSGAGLV RAASLPGAGG
TAARTPLMAN LVGDKMAAAP VPVGAGAAAG ATVGGLAPVG GAGGGMGPMG MAGQGAKGGG
SKPGLTAPAP LVHDLDEDDG DDW
|
|---|
| |