| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_0023 |
|---|
| Symbol | |
|---|
| ID | 4108911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 28661 |
|---|
| End bp | 29896 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 638029149 |
|---|
| Product | type I restriction-modification system specificity subunit |
|---|
| Protein accession | YP_637201 |
|---|
| Protein GI | 108797004 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.834107 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTGT GGCGGGAGTC TGTGCTCGGA GATCTATGCA CGAGAGTGAC GGTCGGGCAC
GTCGGAAAGA TGGCCACCGA GTACGTTCCG GACGGCGTCC CTTTCCTCCG GTCACAAAAC
GTGCGGCCTT TCGTGATTGA CAAGCGCGGC TTGCTCTACA TCGGTGACGA CTTCAACGCA
AAGCTGCGCA AATCGGCGCT CACTGCGGGT GACGTCGTTA TCGTCCGCAC GGGATATCCG
GGAACGGCAG CTGTCGTCCC CGAGGATCTT GATGGATCCA ACTGCGCCGA TCTTGTTGTC
ATTACACCGT CAGACGCATT GAATCCTCAC GTGCTTGCAG CGCTCTTCAA CTCGGTCTAC
GGGCAGCACG CGGTCAGTTC GCAATTAGTT GGCTCTGCGC AACAGCACTT CAACGTTGGC
TCGGCCAAGA CGATGCGGGT CCGACTGCCC GATCGTGCTG AGCAGGACCA CATCGCAGCA
GTCCTCTGTT CGATCAATGA CTTGATCGAA AACAACCGAC GACGTGTGGA GGTTTTGGAG
GGGATGGCGC GGACCATCTA CCGCGAGTGG TTCGTGAAAT TCCGCTACCC AGGCAACGAA
GGCGTCCCTC TTGTCGACTC TGCGCTGGGC CCAGCACCGA AGGGGTGGGA AGTCGCGAAT
CTATTCGACG CTGCTGACGT CGGCTTTGGG TACTCATTCA AGTCTCCCCG GTTTTCGAAT
TCTGGTCCAT TCCAGGTGAT TCGGATCCGC GACATCCCAG TCGGCATCTC AAGGACATAT
ACCGATGAAG CAGCAGATCC GCGCTACGCC GTCTATGACG ATGACGTGCT TATAGGTATG
GACGGTGACT TCCACATGAC GGTCTGGACT GGTGAAGACG CGTGGCTGAA CCAGCGAGTC
ACCCGCCTTC GCCCGAGGCT CGGGCTGTCC GCGCTTCATC TATTGCTCGC GATCGAGGAG
CAGATCAAAG ACTGGAACCG CGCAATTGTT GGCACGACTG TGGCGCATCT AGGTAAGAAG
CATCTCCAAC TTGTCAACGT CCTCGTGCCG AATGATGCAG TACGCATAGA CGCATCTGTC
GTGTTTGCGC CCATCATGGA GGAGCGTCGT GCGCTCATCC AATCAAGTCG GCGGCTCGCC
GCTCTTCGCG ACCTCCTGCT TCCGAAGCTG GTCAGCGGAC AGATCGACGT TTCCGCACTC
GACTTGGATG CAGTGGTTGG AGAACAGGTG GCGTGA
|
|---|
| Protein sequence | MTVWRESVLG DLCTRVTVGH VGKMATEYVP DGVPFLRSQN VRPFVIDKRG LLYIGDDFNA
KLRKSALTAG DVVIVRTGYP GTAAVVPEDL DGSNCADLVV ITPSDALNPH VLAALFNSVY
GQHAVSSQLV GSAQQHFNVG SAKTMRVRLP DRAEQDHIAA VLCSINDLIE NNRRRVEVLE
GMARTIYREW FVKFRYPGNE GVPLVDSALG PAPKGWEVAN LFDAADVGFG YSFKSPRFSN
SGPFQVIRIR DIPVGISRTY TDEAADPRYA VYDDDVLIGM DGDFHMTVWT GEDAWLNQRV
TRLRPRLGLS ALHLLLAIEE QIKDWNRAIV GTTVAHLGKK HLQLVNVLVP NDAVRIDASV
VFAPIMEERR ALIQSSRRLA ALRDLLLPKL VSGQIDVSAL DLDAVVGEQV A
|
|---|
| |