Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6526 |
Symbol | |
ID | 4096494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 1168630 |
End bp | 1172223 |
Gene Length | 3594 bp |
Protein Length | 1197 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638019811 |
Product | YadA-like |
Protein accession | YP_626358 |
Protein GI | 107029263 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport [W] Extracellular structures |
COG ID | [COG5295] Autotransporter adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.542717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGGA AGCAGATTTC GGCGCTCGCC GCCGCGATGT TCACGGGTGC GGGTGTGCTG ATCGCCGGCG CCGCCCATGC GGACAATTTC GTCGACCGCG GCAACCCCGA CAACGCGCTG AACGGCCAGT GTATCGACGG CACCAACCCG CTATGCGTGG CAACGAAGAA CGGCAGTTAC GTGGCGGTCA GCACCGCGAA CGTGACGCAG GGCACCAATG CGAAGGCCGG CACCAGCGGC ATCGCGATCG GCGACCAGTC GAATGCGAGC AGCAAGGGCG GCACCAGCAG CGGCGGCGCG ATCGCGATCG GCGTCGGTTC GCAGGCGCTG GCGAACTCGG CCACCGCGAT CGGCACGGTG GCGGTCGCGC AGGGTAATAC CGCGCTGGCA ATCGGCCGTC AGTCGGCGGC GGTCGGCGAT TTCTCGATGG CGCTCGGCAA CGTCGCGGAT GCGCACGGCA CGAGTTCGAT CGCGCTCGGC CACTCGGCGC TCGCCAGCGG CGACCGCTCG GTCGCGATCG GCGGCGCGAA CCCGACGTCG AGCGACGGCG TATCGGCCGG CGCATCGTAC GACGCGGCGA CGCAGACGCG TGCCGGCGGC ACGCAGTCGG TGGCGATCGG CGCCGGCGCG CAGACGAACG ACAACAACCA GGTGGCGATC GGCTCGGGCA GCGTCGGCGC GAACAACGGC GGCACGCCGG TGTTCGGCGG CACGGCCGCA CCGGTCGGCG GCGCGGTGTC GTTCGGCGCG CTCGGCAGCG AACGCCAGCT CAAGAACGTC GCGGCGGGCG CGGCCGATAC GGATGCCGTC AACGTCCAGC AACTGAAGAA CGTGAACAGT ACGCTGAGCA CGGGCATCGG CAACGTCGAT GCACGCGTGA CGTCGGTCGG CAATTCGCTG TCAACCACGA TCTCGAACGT CGACCAGCGC GTGACCAGCG TCGGCAACAG CCTCAGCACG AGCATCGTCA CGGCCACCAA GAACGTCGTC AAATACACCG ACGACTCGCA TGCGGCGATC GCGCTCGACG GCGCCGCCGG CACGACGATC GGCGGCGTGG CAGCGGGCGT GGCCGATACC GACGCGGTCA ACGTCGGTCA GTTGAAGGGT AGCCTCACGC CGCTGCAAAC GTCCATTTCG ACGGCGGCGT CGAACATCAC GAACCTGCAG AACAGCGTGA CCGGCATCAA CGGCTCGCTG AGCACGGCGG CCTCGAACAT CGCCGGCCTG CAGGCGGCCG ATACGCGCAA CGTCAAGTAC GACGGCGCGA GCGGCTTCGA CTCGGTGACG TTCGCCGGCC CCAACGGCAC GACGCTGCAC AACGTCGCGG ACGGCAAGGA CGCGCACGAC GCCGTCAACG TCGGCCAGTT GAACGGCGGC CTTGCATCGC TCAGCACGAG CGTGACGAAC AACCTCAGCA CGACGCTCGG CAACCTGAGC ACGTCGATCA CCAGCCAGAT CGGCAACGCG ACGAAGAATG CGGTGCAGTA CGACGACGAT GCGCATGGCG GCGTCACGCT CGGCGGCAAG GGCGCAACGG CGCCGGTCGG CCTGCACAAC GTCGCGGATG GCGTGGCGGC GGGCGATGCC GTGAACGTCG GCCAGCTCGG CAAGGCGACC GACGCGCTCA ACCAGTCGAT CACGACCGTC GGCAACCAGG TGACGACGAA TACCGGCAAC ATCGCGGCGC TCCAGCAGGA CGCGCTGCAA TGGAACCCGG GCCTCGGCGC GTACGATGCG AGCCACGGCG GCCACGGCCC GCAGCTGATC AGCAACGTCG CGGCCGGCAA GAGCGGCACC GACGCGGTCA ACGTCGATCA ATTGAACGCG GCGATTCACG ACGGCACGAG CCAGCTCGAC GCGCTCGCCG TGAAATACGA CGATGCGAGC AAGCAGCAGG TATCGCTCGG TGCAGGCAAC GGCGGCAATC CGGTGCGCGT GACCAACGTC GCGGCAGGCA ACGTCGCGGC CGGCAGTACC GACGCGGTGA ACGGCGCGCA ACTGCGGCGC GCGACCGACG GCACCGCGGC CGCGCTCGGC GGCGGCGCGA CGGCGAACCC GGACGGCTCG ATCGGCGCAC CGAACTACAA GATCGGCGGC AGTGCGTTCA ACAACGTCGG CGACGCGCTG ACGAACCTCG ACGGCCGGGT CGGCAGCAAC ACGACGACGC TCGCGAATCA CGAAACGCGC ATCGACAATG CCGAAACGAA TATCGCGGGC AACACGGCGG CGATCGCCGG GCTGCAACAG GATGCACTGC AATTCGACCC GACGCTCGGC GCGTTCAACG CCGCGCGCGG CAGTGCGCCG ACGAAGCTGA CCAACGTGGC CGACGGCAAC GTCGCCGCGG GCAGCACGGA TGCGGTCAAC GGCGGCCAGT TGTCCGGCGT GAAGACCACG CTCGAACAGC AGATCACCAA CGTGTCGAAC CAGGCCGGCG AAGCGGTGAA GAACGTCGTC AAGTACGACG TCGACGCGAG CGGCAACCGG CTGAATTCGG TGTCGCTCGT CGGCGGCGAC GCCACCTCGG CCGTCGTGCT GAAGAACGTC GCGGCGGGCA CCAGCGATAC CGACGCGGTG AACGTGAAGC AGTTGAAGGA CGTGCAGTCG AACCTGAACC AGCTCGGCGC GCTCGCGGTG CAGTACGACG ACAGCTCGAA GAGCACGATC ACGCTCGGCG GCGCGGGCGG CACGCGCATC ACCAACGTGC AGGCCGGCAC GCTGAGCGCC ACCAGCACCG ACGCGGTGAA TGGCTCGCAG CTCTATGCGA CCAACCAGCA GGTGTCGAAG AACACCACCG ACATTTCCAA CCTGCAAGGC AGCGTGACCA ACATCGCGAA CGGCAAGGCC GGCCTCGTGC AGCAGCAGGA CCCGAACGGC GCGATCACGG TCGGAAAGGA TTCGGGCGGC ACCAGCGTGA ACTTCTCCGG TACGGCGGGC GACCGCGTGC TGACCGGCGT CGCGGCGGGC GTGAACGCGA ACGACGCGGT CAACGTGGGC CAGTTCAACG CCGCGCTGCA GAACGTCGCG GCCAACGACA AGATCCGCGC GGCCGCGACC GATGCGAACA CCACGTGGAT CGCGCGCGCC GATGCGGGGG CGATCGGCTC GACGGCGACC GCAACCGGCA AGAATGCGGT GGCCGTTGGC CAGGGCTCCG TCGCCGATCG CGACAACTCG TTCTCGGTCG GCGCGAAGGG CAGCGAGCGC CAGATCACGA ACGTCGCGGC CGGCACGGCG CCGACCGACG CGGTGAACGT GCAGCAGCTG AACGACAACC TCGCGACGGC GTCGACGCAG GCGAAGGGGT ATACCGACCA GCGCATCGGG CAGGTGTACA ACTCGTTCAA CGACCTGAAG AAGGACATGT ACGGCGGTGT CGCGTCGGCG ATGGCGGTGG CCGGCTTGCC GCAGCCGACC GGCGCGGGGC GCTCGATGGT GTCGGCGGCG ACGTCGAACT ATCACGGCCA GCAAGGCTTC GCGGCCGGCT ACTCGTACGT GACGGAGAGC AACCGCTGGG TCGTCAAGGC ATCGGTGACG GGCAACACGC GCTCGGACTT CGGCGCAGTG GTCGGCGCGG GTTATCAGTT CTGA
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Protein sequence | MKRKQISALA AAMFTGAGVL IAGAAHADNF VDRGNPDNAL NGQCIDGTNP LCVATKNGSY VAVSTANVTQ GTNAKAGTSG IAIGDQSNAS SKGGTSSGGA IAIGVGSQAL ANSATAIGTV AVAQGNTALA IGRQSAAVGD FSMALGNVAD AHGTSSIALG HSALASGDRS VAIGGANPTS SDGVSAGASY DAATQTRAGG TQSVAIGAGA QTNDNNQVAI GSGSVGANNG GTPVFGGTAA PVGGAVSFGA LGSERQLKNV AAGAADTDAV NVQQLKNVNS TLSTGIGNVD ARVTSVGNSL STTISNVDQR VTSVGNSLST SIVTATKNVV KYTDDSHAAI ALDGAAGTTI GGVAAGVADT DAVNVGQLKG SLTPLQTSIS TAASNITNLQ NSVTGINGSL STAASNIAGL QAADTRNVKY DGASGFDSVT FAGPNGTTLH NVADGKDAHD AVNVGQLNGG LASLSTSVTN NLSTTLGNLS TSITSQIGNA TKNAVQYDDD AHGGVTLGGK GATAPVGLHN VADGVAAGDA VNVGQLGKAT DALNQSITTV GNQVTTNTGN IAALQQDALQ WNPGLGAYDA SHGGHGPQLI SNVAAGKSGT DAVNVDQLNA AIHDGTSQLD ALAVKYDDAS KQQVSLGAGN GGNPVRVTNV AAGNVAAGST DAVNGAQLRR ATDGTAAALG GGATANPDGS IGAPNYKIGG SAFNNVGDAL TNLDGRVGSN TTTLANHETR IDNAETNIAG NTAAIAGLQQ DALQFDPTLG AFNAARGSAP TKLTNVADGN VAAGSTDAVN GGQLSGVKTT LEQQITNVSN QAGEAVKNVV KYDVDASGNR LNSVSLVGGD ATSAVVLKNV AAGTSDTDAV NVKQLKDVQS NLNQLGALAV QYDDSSKSTI TLGGAGGTRI TNVQAGTLSA TSTDAVNGSQ LYATNQQVSK NTTDISNLQG SVTNIANGKA GLVQQQDPNG AITVGKDSGG TSVNFSGTAG DRVLTGVAAG VNANDAVNVG QFNAALQNVA ANDKIRAAAT DANTTWIARA DAGAIGSTAT ATGKNAVAVG QGSVADRDNS FSVGAKGSER QITNVAAGTA PTDAVNVQQL NDNLATASTQ AKGYTDQRIG QVYNSFNDLK KDMYGGVASA MAVAGLPQPT GAGRSMVSAA TSNYHGQQGF AAGYSYVTES NRWVVKASVT GNTRSDFGAV VGAGYQF
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