| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_6519 |
|---|
| Symbol | |
|---|
| ID | 4096487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | + |
|---|
| Start bp | 1163135 |
|---|
| End bp | 1164127 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638019804 |
|---|
| Product | ABC transporter, substrate-binding protein, aliphatic sulphonates |
|---|
| Protein accession | YP_626351 |
|---|
| Protein GI | 107029256 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGT TCTGGTCCCG CGTGTGGCAA TCCGCGGCCC TCGTCGTTGC CGCGCTTGCC
GGCCTCATGT CCATGCAAGC GCAGGCGGCG ACGCCTGCGG AAATCCGCGT CGACTACGCG
TACTACTCGC CCGAGAGTCT CGTGATCCGC CACTTCGGCT GGCTCGACGA TGCGTTCAAG
GCCGACGGTA CGTCGATTCG CTGGGTGCTG AGCCTCGGCA GCAACCGCGC GCTCGAATAC
CTGAACAGCG GCGCGGTCGA TTTCGGCTCG GCCGCGGGGC TCGCGTCGGT GCTCGCCCGC
GCGAACGGCA ACCCGATCCA CACGGTCTAC GTGTTCTCGC GCCCCGAATG GACGGCGCTC
GTGGTACGCA AGGATTCGCC GATCCGTTCG CTCGCCGATC TGAAGGGCAA GAAGATCGCC
GCGACGCGCG GCACCGATCC GTTCCTGTTC ACGCTGCGCG CGCTGCACAC CGTTGGCCTG
ACGCGCGACG ACGTCGAGAT CGTCAACCTG CAGCATCCGG ACGGCCGCAC CGCGCTCGCG
AACGGTCAGG TCGATGCGTG GGCCGGGCTC GATCCGCACA TGGCCGCCGC CCAGCTCGAC
GATGGCGCGC GCCTGCTGTA TCGCAACGTC GCGTTCAATA CGTACGGGTT CCTGAATGTT
CGCGACGCGT TCGCCAGCCA GTATCCGCAG GCGGTCGAGC GCGTGCTGAA GGTCTACGAC
CGCGCACGCC AGTGGATCGG CGCGCATCCG GCCGAAACCG CGCAGATCAT TGCCGACGAA
TCGAAGGTGT CGCTGCCGGT CGCGAAGCTG CAGCTTCAGC GCAACGACTT CAGCGATCCG
GTGCCGGGCG ACACGCAGCG CGCGGCGCTG AAGGCCGCGG CGCCGGTGCT GACGGCCGAG
CAGTTGACCA AACCGGGCGT CGATCCCGCG AAGATCGTCG ATACGCTGAT CGATCCGTCG
TTCGCGCGCC CGATCGTCGC CGCGTCGCAC TGA
|
|---|
| Protein sequence | MKPFWSRVWQ SAALVVAALA GLMSMQAQAA TPAEIRVDYA YYSPESLVIR HFGWLDDAFK
ADGTSIRWVL SLGSNRALEY LNSGAVDFGS AAGLASVLAR ANGNPIHTVY VFSRPEWTAL
VVRKDSPIRS LADLKGKKIA ATRGTDPFLF TLRALHTVGL TRDDVEIVNL QHPDGRTALA
NGQVDAWAGL DPHMAAAQLD DGARLLYRNV AFNTYGFLNV RDAFASQYPQ AVERVLKVYD
RARQWIGAHP AETAQIIADE SKVSLPVAKL QLQRNDFSDP VPGDTQRAAL KAAAPVLTAE
QLTKPGVDPA KIVDTLIDPS FARPIVAASH
|
|---|
| |