Gene Bcen_6504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6504 
Symbol 
ID4096509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand- 
Start bp1144749 
End bp1145846 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content65% 
IMG OID638019789 
ProductD-xylose ABC transporter, substrate-binding protein 
Protein accessionYP_626336 
Protein GI107029241 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4213] ABC-type xylose transport system, periplasmic component 
TIGRFAM ID[TIGR02634] D-xylose ABC transporter, substrate-binding protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0443872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGCGG TGCAATCCGG CGGCCGCCCG CGGTTCGTGA GGTGGTTCCA TAACAAGGAG 
TCTGGAGACA TGAAAACCGT GACGCGTCGT ACCGTATTGC ATTCCCTTGC CGGCGCCGCC 
GCGCTGGCGA TCCTCGCGCT GGGCTCGCCG CTCGCCCACG CGAGCAAGGA CAAGCCCGAG 
ATCGGCTTCT GTATCGACGA CCTGCGCGTC GAGCGCTGGT CGCGCGATCG CGACTATTTC 
GTCGCGGCCG CGACGAAGCT CGGCGCGAAG GTGTCGGTGC AGTCGGCCGA TGCGAACGAG 
GCGCGGCAGA TTTCCCAGAT CGAGAACCTG ATCTCGCGCG GCGTCGACGT GATCGTGATC 
GTGCCGTTCA ACTCGAAGAC GCTCGGCAAC GTCGTCGCCG AAGCGCGCAA GGCCGGCATC 
AAGGTCGTGT CGTACGATCG CCTGATCCTC GACGCCGACG TCGACGCCTA CATCTCGTTC 
GACAACGAGA AGGTCGGCGA GCTGCAGGCG CAGGGCGTGT TCGACGCGAA GCCGAAGGGC 
AACTATTTCC TGCTGGGCGG CGCGCCGACC GACAACAACG CGAAGATGCT GCGCGAAGGA 
CAACTGAAGG TGCTCAAGCC GGCGATCGAC CGCGGTGACA TCAAGGTGGT CGGCCAGCAG 
TGGGTGCCCG AATGGAGCGC CTCGACCGCG CTGCGGATCG TCGAGGACGC GCTGACCGCG 
AACAACAACA AGATCGATGC GATCGTCGCG TCGAACGACG GCACGGCCGG CGGCGCGATC 
CAGGCGCTCG CCGCGCAGCA TCTAGCCGGC AAGGTGCCGG TGTCCGGGCA GGATGCGGAT 
CTGGCCGCGG TCAAGCGCGT GATCGCCGGC ACGCAGACGA TGACCGTCTA CAAGCCGCTG 
AAGCTGATCG CGAGCGAAGC TGCGAAGCTC GCGGTCGATC TCGCGAAGGG CACGAAGCCC 
GCGTTCAACG CGCAATACGA CAACGGCAAG AAGAAGGTCG ACACGGTGCT GCTGCAGCCG 
ACGCTGCTGA CCAAGCGCAA CGTCGACGTC GTCGTGAAGG ACGGCTTCTA TACCCAGGCC 
CAGCTGGCGA GCCAGTAA
 
Protein sequence
MRAVQSGGRP RFVRWFHNKE SGDMKTVTRR TVLHSLAGAA ALAILALGSP LAHASKDKPE 
IGFCIDDLRV ERWSRDRDYF VAAATKLGAK VSVQSADANE ARQISQIENL ISRGVDVIVI 
VPFNSKTLGN VVAEARKAGI KVVSYDRLIL DADVDAYISF DNEKVGELQA QGVFDAKPKG 
NYFLLGGAPT DNNAKMLREG QLKVLKPAID RGDIKVVGQQ WVPEWSASTA LRIVEDALTA 
NNNKIDAIVA SNDGTAGGAI QALAAQHLAG KVPVSGQDAD LAAVKRVIAG TQTMTVYKPL 
KLIASEAAKL AVDLAKGTKP AFNAQYDNGK KKVDTVLLQP TLLTKRNVDV VVKDGFYTQA 
QLASQ