Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6478 |
Symbol | |
ID | 4097148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 1113924 |
End bp | 1115363 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638019765 |
Product | amino acid permease-associated region |
Protein accession | YP_626312 |
Protein GI | 107029217 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAAT CGTCACCCCG GTCCGAAGCG GGGCTCAGCA AGAACGCCGT CGGACTCTCA CACATCGTCT TCTTCGTCGT CGCCGCGGCC GCGCCGCTCA CCGCGATGGT CGGCGCGACA CCCGCGGCGT TCTCGCTCGG CAACGGCCCC GGCGTGCCGG GCGTATTCGT GCTGGCGGGC GTGATGTACC TGATTTTCAG CATCGGCTAT GCCGCGATGA GCCGGCACAT CTCCAATGCG GGCGCGTTCT ACGCATACAT CGCGAACGGG CTCGGGCGCC CTGCCGGCGT GGGCGGCGCA TTCGTCGCGA TCGTCGCGTA CAACGCGGTG CAGATCGCGA TCTACTGCAT GTTCGGCTTC TTCCTGAACG ACAGCATCCA GCGGCACTAT GGCGTCGACG TGCCGTGGTG GGCGTTCGCG CTCGCGTGCG TCGTCGCGGT CCACTTCTGC GGCGCGCGGC GCATCGAGTT CAGCGGCCGG CTGCTCGGCA TGCTGATGAT CGGTGAAATC GCGATCGTGA TGCTGCTCGA TCTCGCGATC GTCGCGCACG GCGCGAGCAC CGGCGGCTTC AGCGCGAAAC CGTTCAGCCC CGCGATGGTG TTCGCGCCCG GGCTCGGCAC CGCGCTCGTG TTCGTGCTCG GCTCGTACAT GGGCTTCGAG GCGACGGCAA TCTTCTCCGA GGAGGCGCGC GACCCGAAGC GCACGATTCC GCGCGCCACC TACCTGGCCG TGATCCTCAT CATGGCGTTC TACGCGCTGT CGTCGTGGGC GATCGTCGAG GCGTGGGGCG AGCACGCGAT CGCCGCGCAG GCCGCGCGCG ATCCGGCCAA TCTCTGGTTT GCCGTCAGCG GCCGGCTGCT CGGCGGCATC GCGACGGACG CGATGAACGT GCTGCTCGTC ACGAGCCTGT TCGCGGCCAT CCTGTCGTTC CACAACACGA TCACGCGCTA TTTCTACGCG ATGGGCCGCG AACGCGTACT GTGGCGCAAG CTCGGCCATA CGTGCCCCGT GCACCGTTGC CCGGACGTCG CCGGCAAGGT GCAGACGCTG ATCGCGCTCG CGGCCATCGC CGGATCGGCG GCCTTTCGCC TCGACCCGTT CGCGGTCGTG TTCTCGTGGA TGAGCGCGCT GGCCACGATC GGCATCATCG CGGTGCAGAT CCTGGTGGCG GCCTCGGTGA TTGCGTTCTT CGCGCGCGAC CGTCGGGACG CCGGCGTCGT GCACCGCCTG ATCGCGCCGC TCGTCAGCGT GATCGCGCTC GGCGCGTGTC TCGTGCTGGT CGTGCGCAAC CTGTCCGTGC TGAGCGGATC GGATTCGACC TTCGTCGCGA TGTTTCCGTA TTTCCTCGTC GCCGTCGGCG CGCTCGGCAT CCGCGCCGCG CTGCGATTGA AGCGCAGCGA CCCCGACCTG TATCGCGAAC TCGGGCGCGC CGCCCAGTAG
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Protein sequence | MNESSPRSEA GLSKNAVGLS HIVFFVVAAA APLTAMVGAT PAAFSLGNGP GVPGVFVLAG VMYLIFSIGY AAMSRHISNA GAFYAYIANG LGRPAGVGGA FVAIVAYNAV QIAIYCMFGF FLNDSIQRHY GVDVPWWAFA LACVVAVHFC GARRIEFSGR LLGMLMIGEI AIVMLLDLAI VAHGASTGGF SAKPFSPAMV FAPGLGTALV FVLGSYMGFE ATAIFSEEAR DPKRTIPRAT YLAVILIMAF YALSSWAIVE AWGEHAIAAQ AARDPANLWF AVSGRLLGGI ATDAMNVLLV TSLFAAILSF HNTITRYFYA MGRERVLWRK LGHTCPVHRC PDVAGKVQTL IALAAIAGSA AFRLDPFAVV FSWMSALATI GIIAVQILVA ASVIAFFARD RRDAGVVHRL IAPLVSVIAL GACLVLVVRN LSVLSGSDST FVAMFPYFLV AVGALGIRAA LRLKRSDPDL YRELGRAAQ
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