Gene Bcen_6472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6472 
Symbol 
ID4097142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand- 
Start bp1106290 
End bp1107237 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content66% 
IMG OID638019759 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_626306 
Protein GI107029211 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.555546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAT CCATCCTGCT GGCGGCATCG GCGTGCGTGT TCGCGGTATG CAGCAGCGGT 
GCGTATGCGG CGGGCGGCGA AATCGCGGTG ATCGTCAAGA CGGTCAATTC GAACTACTGG 
CAGAACGTGC AGAAGGGCGC GAAGGCGGCG CTCGACGGCG CCAAGGGCTA CACGATGACG 
TTCCAGGGGC CGGCGGCCGA GTCGGACATC AGCGGGCAGG TCAACATGGT CGACAACGCG 
GTCACGCGTC ACGTGGCGGG CATCGTGCTC GCGCCGTCCG ATCCCGATGC GCTCGTGCCC 
GCGATCAAGA AGGCGTGGGA AGCGCACATT CCCGTCGTGC TGATCGACTC GGCCATCGCC 
GACGCCGGCA AACCGTACTA CCAGGCGTTC CTGTCGACCG ACAACGAGAA GGCGGGCGCG 
CTGTGCGCGA AGGCGCTGAT CGACCGCGTC GGGCAGTCTG GCAAGATCGC GATCATGTCG 
TACGTGCCGG GCGCGGGGTC GGAGGTCAGC CGTGTCGGCG GGTTCCGCAA GTACATCGAG 
AGCCATTCGA AGCTGCAGGT CGTCGGCCCG TACTACTCGC AATCGCAAAT GGCGACCGCG 
CTGAACCAGA CGACCGACGT GCTGTCGGCG AACCCGGACC TGAAGGGCAT CTTCGGCGCG 
AACGAGCCGA CCGCGGTCGG GATGGGCCGC GCGCTGAAGC AGTCGGGTAA GGCGGGCAAG 
GTGGTGGCGA TCGGGTTCGA CGGCAACGAG GACCTGCAGG GCTTCGTGCG CGACGGCACC 
GTGCAGGCGA TCGCCGTGCA GGGCTCGTGG CAGATGGGGA ACCAGGGCGT GCGCACGGCG 
CTCGACGTCA TCGAGCGCAA GCCCGCGCCG AAGCTGATCG ATACCGGCGT CGTGATGGTC 
GACAAGCAGA ACCTCGATTC GCAGGCGGCG AAGAACGTCC TGTACTGA
 
Protein sequence
MNKSILLAAS ACVFAVCSSG AYAAGGEIAV IVKTVNSNYW QNVQKGAKAA LDGAKGYTMT 
FQGPAAESDI SGQVNMVDNA VTRHVAGIVL APSDPDALVP AIKKAWEAHI PVVLIDSAIA 
DAGKPYYQAF LSTDNEKAGA LCAKALIDRV GQSGKIAIMS YVPGAGSEVS RVGGFRKYIE 
SHSKLQVVGP YYSQSQMATA LNQTTDVLSA NPDLKGIFGA NEPTAVGMGR ALKQSGKAGK 
VVAIGFDGNE DLQGFVRDGT VQAIAVQGSW QMGNQGVRTA LDVIERKPAP KLIDTGVVMV 
DKQNLDSQAA KNVLY