Gene Bcen_6457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6457 
Symbol 
ID4096444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp1085801 
End bp1087513 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content71% 
IMG OID638019744 
ProductLuxR family transcriptional regulator 
Protein accessionYP_626291 
Protein GI107029196 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATGC GGTGCCGCCC GGATCTCCAG TGCGCCGAGT ATCGCAATCG CCCGGCCTTG 
CCGCTATCGG TCAGATGTCC GATGGCGACG TCCTCCGGTT GCCTGCACCG AGGCGGGGGG
ACTTCGCGCC GGGCCGGCCG CGGCGAACCC CGAGCCCCGA TGCTCATGCT CATGCACGCC
GCGACGCCGT CGCGTATGAT CGTTTTCCCA TCCTTGCAAA CGTCCCGGCC CCGCCCGATG
TCCGACGCCC AAGCCCGTCA CGCCCCGCTG CGCATATTCG ACGCCGTACG CGCGCTGGCC
TTCATCGGCG ACCTCAGCAT GGGCCAGCCG ACCGACCATT CGCCGCGCAC CGGCTGGCTG
GCGGCGCAGC TCGCCCATGC GGCACGATTC GACGCATCGG TGTGCGACAC GGCGCGCGAA
GTGGCGCTGT TGCGCTGGTC GGGCTGCACG GCGAACGCGG CGGGTTTCGC GCAGGTATTC
GGCGACGACG TCGCGATCCG CGCCGCGATG CTCGAGGGCC GGCCCGGCAT CGCCGAAGCG
ATCGGCGGGG CGGGCGTCGC GCTGATCCCG CTCGCACAGA TCCATTGCGA AGTCTCGGGC
GAGGTGGCGC GAATACTCGG TCTGTCCAGC GCGACGGAAA CCGCGCTGCG GCATATCTTC
GAAACCTGGG ACGGTAACGG GCTGCCCGCC CGGCTCGTGC ACGAACAGGT GCCGCCCGCC
GTGTCGATCG TCGCGCTCGC GGGCGACCTC GACGTGTTCA GCCGCACGTA CGGCATCGAA
CGGGCCGTCG AACTGATCGG GCAACGCGCG GGGTCACGCT ACCCGGCCAT GCTCGTCGAG
ACGGCTGCGC GTGAGGCGCC GCGCTGGCTG GCGGCGCTCG AGCACATGGC GCCCGCCGAC
CTGGACGCCG CATTGGCCAC ACCGGACATG CAGGGCGCGA CGTCCGCGGA ATTGATTGCG
GACGTCATCG ATCTGAAACT GCCGTGGATG ACGGGTTTTT CGCGTTCGGT CGCCGCGACG
GCGGCCGCGT GTTACGGCCG TCTCTCGCCG GACGAGGCGG CGCGCGAACG CGTGTACCGC
GCCGGACTGA TTCATGGCAT CGGTCGGGCC GCGGTGCCGA ACGACGTGTG GAATCTGCCG
ACGCGGCTGC CTGCCAGCGC CTGGGAAAAG GTGCGGCTCG TGCCGTACTG GACCGAGCGC
GCCGGCCGGC AGACCGGCGC GCTCGGCGAA GCCGCGGTGC TCGCGTCGTA TGCCTATGAA
CGGCTGGACG GCTCGGGTTA TTTTCGCGGC GCGCGCGAGG CGGCGTTGAC GCTGGAGGCG
CGCGTGCTGG CGGCGTCGCT GGCGTGGGTC GCGTTGCGCT CGGCGCGTCC GTGGCGCGCG
GCGCTGAGCG ATGCCGCGGC CGCTGGCCAG TTGCAGGAAG AAGCGGCGTG CGGCCGGCTG
TGCGGCGAAG CGGTGGCCGC GCTCGTGACG GGTGGCGCGC CCTTGCTTCG GCGCACCGCC
ACGCGCCAGT CGCCCGCTGG CCCGCGCCTG TCCGCACGGG AAGTCGACGT CCTGCGGGCG
ATCTCCCGCG GCGCGAGCAA CAAACAAGTC GCGCAGGCGC TCGCGATGAG TCCGAGCACG
GTGCGAACCC ATGTCGAGAA GGCGTTCCGC AAGCTCGAAT GTTCGACGCG TGCCGCGGCG
ACCCTCAAGG CGTCGGCGCT GGGGTTGCTG TGA
 
Protein sequence
MRMRCRPDLQ CAEYRNRPAL PLSVRCPMAT SSGCLHRGGG TSRRAGRGEP RAPMLMLMHA 
ATPSRMIVFP SLQTSRPRPM SDAQARHAPL RIFDAVRALA FIGDLSMGQP TDHSPRTGWL
AAQLAHAARF DASVCDTARE VALLRWSGCT ANAAGFAQVF GDDVAIRAAM LEGRPGIAEA
IGGAGVALIP LAQIHCEVSG EVARILGLSS ATETALRHIF ETWDGNGLPA RLVHEQVPPA
VSIVALAGDL DVFSRTYGIE RAVELIGQRA GSRYPAMLVE TAAREAPRWL AALEHMAPAD
LDAALATPDM QGATSAELIA DVIDLKLPWM TGFSRSVAAT AAACYGRLSP DEAARERVYR
AGLIHGIGRA AVPNDVWNLP TRLPASAWEK VRLVPYWTER AGRQTGALGE AAVLASYAYE
RLDGSGYFRG AREAALTLEA RVLAASLAWV ALRSARPWRA ALSDAAAAGQ LQEEAACGRL
CGEAVAALVT GGAPLLRRTA TRQSPAGPRL SAREVDVLRA ISRGASNKQV AQALAMSPST
VRTHVEKAFR KLECSTRAAA TLKASALGLL