Gene Bcen_6443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6443 
Symbol 
ID4096430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand- 
Start bp1070907 
End bp1071860 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content68% 
IMG OID638019730 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_626277 
Protein GI107029182 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.738154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGAA TTCTCATCGG GCTGATCGGC CGGCGCATCG CGGTCACCGC GCTGACGCTG 
CTGATCGTGT CCGCGATCAT CTTCACGATC ACGAACCTGC TGCCGGGCGA CGCCGCGCAG 
GCCGCGCTCG GCCAGTCCGC GACGCCGGAG ACGGTCGCCG CGCTGCGCCA GCAGTTCGGT 
CTCGACATGC CGGCGCACGT GCGCTACCTG CACTGGCTCG CCGGGCTGCT GCACGGCGAC 
TTCGGCCGGT CGTTTTCCGG CGACATGCCG GTGTCGGAGC TGATCGGCGG GCGCCTGCCG 
AAGTCGCTCG CGCTGGCGGC GATCACGACC GCCGTGTCGG TGCCGATCGC GCTGCTGCTC 
GGCATCCTCG CGGCGGTCAA GCGCGAGTCG GTGGTCGACC GCGTGATCAG CCTCGGCACG 
CTGTCGCTCG TCGCGACGCC GGAATTCCTG ATCGCGACGG TCGCCGTGCT CGTGTTCGCG 
GTGAAGCTGC ACTGGCTGTC CGCGCTGTCG TACAGCGGCC CGATCGAAAG CCTGCACGAT 
TTCCTGCGTG CGTATGCGAT GCCGGTGCTG ACGCTGTGCG CGGTCGTGAT CGCGCAGATG 
GCGCGGATGA CGCGCGCCGC GGTGATCGAG CAATTGAGCG CGTCGTACGT CGAGATGGCC 
ACGTTGAAGG GCGCGAGCCC CGCGCGCGTC GTGCTACGCC ATGCGTTGCC CAACGCGATC 
GGCCCGATCG CCAACGCGAT CGCGCTGAGC CTGTCGTATC TGCTCGGCGG CGTGATCGTC 
GTCGAGACGA TCTTCAACTA TCCGGGCCTC GCGAGCCTGA TGGTCGATGC CGTCAGCAAT 
CGCGATTTCC CGTTGGTCCA GGCGTGCACG CTGATCTTCT GCGTCGCTTA CCTGACGCTC 
GTGCTGTTCG CCGACCTGTG CTCGATCGTG TCGAACCCGC GACTGCGCAC CTGA
 
Protein sequence
MNRILIGLIG RRIAVTALTL LIVSAIIFTI TNLLPGDAAQ AALGQSATPE TVAALRQQFG 
LDMPAHVRYL HWLAGLLHGD FGRSFSGDMP VSELIGGRLP KSLALAAITT AVSVPIALLL 
GILAAVKRES VVDRVISLGT LSLVATPEFL IATVAVLVFA VKLHWLSALS YSGPIESLHD 
FLRAYAMPVL TLCAVVIAQM ARMTRAAVIE QLSASYVEMA TLKGASPARV VLRHALPNAI 
GPIANAIALS LSYLLGGVIV VETIFNYPGL ASLMVDAVSN RDFPLVQACT LIFCVAYLTL 
VLFADLCSIV SNPRLRT