Gene Bcen_6430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6430 
Symbol 
ID4096398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp1054729 
End bp1056024 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content67% 
IMG OID638019717 
Productmetabolite 
Protein accessionYP_626264 
Protein GI107029169 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00883] metabolite-proton symporter 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCCCT CGTCCAGCCT TCCGGCCGAA CGCTCGAAGG CCGCCGCGAT CTTTCGCGTC 
ACGGCCGGCA ACTTTCTCGA GCAGTTCGAC TTCTTCCTGT TCGGCTTCTA CGCCACGCAG
ATCGCCAACG TCTTCTTCCC CGCGCAAAGC GAATTCGCAT CGTTGATGAT GACCTTCGCC
GTGTTCGGCG CCGGCTTCCT GATGCGGCCG CTCGGCGCGA TCGTGCTGGG CGCGTACATC
GACGAGGTCG GCCGCCGCAA GGGCCTGATC GTCACGCTGT CCATCATGGC GAGCGGCACC
ATCCTGATCG CGTTCGTGCC GGGCTACGCG ACGATCGGGC TGCTGGCGCC CGTGCTCGTG
CTGATCGGCC GGCTGCTGCA GGGCTTCTCC GCGGGCGCCG AGCTGGGCGG CGTGTCGGTC
TATCTCGCCG AGCTGGCAAC GCCGGGCCGC AAGGGCTTCT TCACGAGCTG GCAATCGGCG
AGCCAGCAGG TGGCGATCGT CATCGCGGCG GCCCTCGGCT TCGCGCTCAA TCAGTGGCTG
AGCGCCTCGC AGATCGCGGC GTGGGGATGG CGCGTGCCGT TCTTCGTCGG CTGCATGATC
GTGCCGTTCA TCTTCATGCT GCGCCGCAAT CTGGAGGAAA CCCAGGAGTT CAAGGCGCGC
AAGCATCGTC CGGGCATGAA GGAGGTGTTC GGCACGCTGG TCCAGAACTG GGGCGTCGTG
GTCGCCGGCA TGATGCTGGT CGCGATGACC ACCACGAGCT TCTACCTGAT CACCGTCTAC
GCGCCGACCT TCGGCAAGAC GGTGCTGCAT CTGAGCACCG CCGACAGCCT GCTCGTCACG
CTCTGCGTCG GCGTGTCGAA CTTCGTGTGG TTGCCGATCG GCGGGGCGCT GTCCGACCGG
ATCGGCCGCC GGCCGCTGCT GGTCGGCATG ACGATGCTCA CCGTCGTGAC CGCTTACCCG
GCGCTGTCGT TCCTCGCGCA TGCGCCGTCG TTCGTCAACA TGCTGCTCGT GCTGCTCTGG
CTGTCGTTCA TGTACGGCAT GTACAACGGC GCGATGGTCG TCGCGCTCAC CGAAGTGATG
CCGGTGCAGG TGCGCGTCGC GGGCTTCTCG CTCGCCTACA GCCTCGCGAC GGCCGTGTTC
GGCGGCTTCA CGCCGGCCAT CTCGACCGGG CTCATTCACA TGACGGGCGA CAAGGCCGCA
CCGGGCTACT GGATGAGCTT CGCCGCGGTG TGCGCGCTGC TCGCGACGTT CGCGCTCTAT
CGTCGCCGCG CCGCGACGTT GACGCCGGCG CATTGA
 
Protein sequence
MHPSSSLPAE RSKAAAIFRV TAGNFLEQFD FFLFGFYATQ IANVFFPAQS EFASLMMTFA 
VFGAGFLMRP LGAIVLGAYI DEVGRRKGLI VTLSIMASGT ILIAFVPGYA TIGLLAPVLV
LIGRLLQGFS AGAELGGVSV YLAELATPGR KGFFTSWQSA SQQVAIVIAA ALGFALNQWL
SASQIAAWGW RVPFFVGCMI VPFIFMLRRN LEETQEFKAR KHRPGMKEVF GTLVQNWGVV
VAGMMLVAMT TTSFYLITVY APTFGKTVLH LSTADSLLVT LCVGVSNFVW LPIGGALSDR
IGRRPLLVGM TMLTVVTAYP ALSFLAHAPS FVNMLLVLLW LSFMYGMYNG AMVVALTEVM
PVQVRVAGFS LAYSLATAVF GGFTPAISTG LIHMTGDKAA PGYWMSFAAV CALLATFALY
RRRAATLTPA H